Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC14.09□□□□□ -0.15
Thbs1P35441 AC073947.1-201ENSMUST00000216991 649 ntBASIC14.09□□□□□ -0.15
Thbs1P35441 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Thbs1P35441 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.09□□□□□ -0.15
Thbs1P35441 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Thbs1P35441 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Thbs1P35441 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Thbs1P35441 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Thbs1P35441 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Thbs1P35441 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Thbs1P35441 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Thbs1P35441 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Thbs1P35441 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.09□□□□□ -0.15
Thbs1P35441 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.09□□□□□ -0.15
Thbs1P35441 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Thbs1P35441 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Thbs1P35441 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Thbs1P35441 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Thbs1P35441 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Thbs1P35441 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Thbs1P35441 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Thbs1P35441 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Thbs1P35441 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Thbs1P35441 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Thbs1P35441 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Thbs1P35441 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Thbs1P35441 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Thbs1P35441 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Thbs1P35441 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.08□□□□□ -0.16
Thbs1P35441 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.08□□□□□ -0.16
Thbs1P35441 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.08□□□□□ -0.16
Thbs1P35441 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Thbs1P35441 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Thbs1P35441 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.08□□□□□ -0.16
Thbs1P35441 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Thbs1P35441 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Thbs1P35441 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Thbs1P35441 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Thbs1P35441 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Thbs1P35441 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Thbs1P35441 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.08□□□□□ -0.16
Thbs1P35441 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Thbs1P35441 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Thbs1P35441 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Thbs1P35441 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.08□□□□□ -0.16
Thbs1P35441 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Thbs1P35441 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Thbs1P35441 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
Thbs1P35441 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Thbs1P35441 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.07□□□□□ -0.16
Thbs1P35441 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Thbs1P35441 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Thbs1P35441 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Thbs1P35441 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Thbs1P35441 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Thbs1P35441 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Thbs1P35441 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Thbs1P35441 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.07□□□□□ -0.16
Thbs1P35441 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Thbs1P35441 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Thbs1P35441 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Thbs1P35441 Gm44357-201ENSMUST00000195897 142 ntBASIC14.07□□□□□ -0.16
Thbs1P35441 Gm19658-201ENSMUST00000196231 138 ntBASIC14.07□□□□□ -0.16
Thbs1P35441 Gm44367-201ENSMUST00000196836 138 ntBASIC14.07□□□□□ -0.16
Thbs1P35441 Gm44350-201ENSMUST00000197197 138 ntBASIC14.07□□□□□ -0.16
Thbs1P35441 Gm44390-201ENSMUST00000197533 144 ntBASIC14.07□□□□□ -0.16
Thbs1P35441 Gm44313-201ENSMUST00000198018 138 ntBASIC14.07□□□□□ -0.16
Thbs1P35441 Gm44486-201ENSMUST00000198508 138 ntBASIC14.07□□□□□ -0.16
Thbs1P35441 Gm44314-201ENSMUST00000199263 138 ntBASIC14.07□□□□□ -0.16
Thbs1P35441 Gm44394-201ENSMUST00000199558 138 ntBASIC14.07□□□□□ -0.16
Thbs1P35441 Gm44484-201ENSMUST00000199873 138 ntBASIC14.07□□□□□ -0.16
Thbs1P35441 Gm44466-201ENSMUST00000200264 138 ntBASIC14.07□□□□□ -0.16
Thbs1P35441 Gm44359-201ENSMUST00000200671 138 ntBASIC14.07□□□□□ -0.16
Thbs1P35441 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.07□□□□□ -0.16
Thbs1P35441 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Thbs1P35441 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Thbs1P35441 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Thbs1P35441 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Thbs1P35441 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Thbs1P35441 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Thbs1P35441 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Thbs1P35441 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Thbs1P35441 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Thbs1P35441 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Thbs1P35441 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Thbs1P35441 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Thbs1P35441 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Thbs1P35441 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.07□□□□□ -0.16
Thbs1P35441 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Thbs1P35441 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Thbs1P35441 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Thbs1P35441 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Thbs1P35441 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.06□□□□□ -0.16
Thbs1P35441 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Thbs1P35441 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Thbs1P35441 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Thbs1P35441 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Thbs1P35441 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Thbs1P35441 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Thbs1P35441 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms