Protein–RNA interactions for Protein: F6UCX4

Sptbn5, Spectrin beta, non-erythrocytic 5 (Fragment), mousemouse

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn5F6UCX4 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
Sptbn5F6UCX4 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sptbn5F6UCX4 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Sptbn5F6UCX4 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC18.29■□□□□ 0.52
Sptbn5F6UCX4 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC18.29■□□□□ 0.52
Sptbn5F6UCX4 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Sptbn5F6UCX4 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sptbn5F6UCX4 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sptbn5F6UCX4 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Sptbn5F6UCX4 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Sptbn5F6UCX4 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Sptbn5F6UCX4 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sptbn5F6UCX4 AC159649.2-201ENSMUST00000222984 3223 ntBASIC18.29■□□□□ 0.52
Sptbn5F6UCX4 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sptbn5F6UCX4 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC18.29■□□□□ 0.52
Sptbn5F6UCX4 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Sptbn5F6UCX4 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Sptbn5F6UCX4 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sptbn5F6UCX4 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Sptbn5F6UCX4 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sptbn5F6UCX4 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sptbn5F6UCX4 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sptbn5F6UCX4 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sptbn5F6UCX4 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sptbn5F6UCX4 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sptbn5F6UCX4 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sptbn5F6UCX4 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sptbn5F6UCX4 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC18.28■□□□□ 0.52
Sptbn5F6UCX4 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC18.28■□□□□ 0.52
Sptbn5F6UCX4 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sptbn5F6UCX4 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sptbn5F6UCX4 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sptbn5F6UCX4 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Sptbn5F6UCX4 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Sptbn5F6UCX4 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sptbn5F6UCX4 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sptbn5F6UCX4 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sptbn5F6UCX4 Ap5m1-205ENSMUST00000227431 3757 ntBASIC18.28■□□□□ 0.52
Sptbn5F6UCX4 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sptbn5F6UCX4 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sptbn5F6UCX4 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Sptbn5F6UCX4 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Sptbn5F6UCX4 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sptbn5F6UCX4 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sptbn5F6UCX4 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sptbn5F6UCX4 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC18.28■□□□□ 0.52
Sptbn5F6UCX4 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sptbn5F6UCX4 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sptbn5F6UCX4 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sptbn5F6UCX4 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sptbn5F6UCX4 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sptbn5F6UCX4 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sptbn5F6UCX4 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sptbn5F6UCX4 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sptbn5F6UCX4 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sptbn5F6UCX4 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sptbn5F6UCX4 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sptbn5F6UCX4 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Sptbn5F6UCX4 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sptbn5F6UCX4 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC18.27■□□□□ 0.52
Sptbn5F6UCX4 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sptbn5F6UCX4 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC18.27■□□□□ 0.52
Sptbn5F6UCX4 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.27■□□□□ 0.52
Sptbn5F6UCX4 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sptbn5F6UCX4 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Sptbn5F6UCX4 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sptbn5F6UCX4 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Sptbn5F6UCX4 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Sptbn5F6UCX4 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Sptbn5F6UCX4 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Sptbn5F6UCX4 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
Sptbn5F6UCX4 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC18.27■□□□□ 0.51
Sptbn5F6UCX4 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC18.27■□□□□ 0.51
Sptbn5F6UCX4 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sptbn5F6UCX4 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sptbn5F6UCX4 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sptbn5F6UCX4 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sptbn5F6UCX4 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sptbn5F6UCX4 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sptbn5F6UCX4 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Sptbn5F6UCX4 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sptbn5F6UCX4 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Sptbn5F6UCX4 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sptbn5F6UCX4 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Sptbn5F6UCX4 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC18.26■□□□□ 0.51
Sptbn5F6UCX4 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Sptbn5F6UCX4 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Sptbn5F6UCX4 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC18.26■□□□□ 0.51
Sptbn5F6UCX4 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sptbn5F6UCX4 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Sptbn5F6UCX4 Gm18032-201ENSMUST00000222541 538 ntBASIC18.26■□□□□ 0.51
Sptbn5F6UCX4 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Sptbn5F6UCX4 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Sptbn5F6UCX4 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sptbn5F6UCX4 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Sptbn5F6UCX4 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Sptbn5F6UCX4 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sptbn5F6UCX4 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sptbn5F6UCX4 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sptbn5F6UCX4 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms