Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC15.58■□□□□ 0.08
Cldnd1Q9CQX5 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cldnd1Q9CQX5 Gm8597-201ENSMUST00000191525 1109 ntBASIC15.58■□□□□ 0.08
Cldnd1Q9CQX5 AL593843.1-201ENSMUST00000195891 145 ntBASIC15.58■□□□□ 0.08
Cldnd1Q9CQX5 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cldnd1Q9CQX5 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cldnd1Q9CQX5 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC15.58■□□□□ 0.08
Cldnd1Q9CQX5 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cldnd1Q9CQX5 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Cldnd1Q9CQX5 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Cldnd1Q9CQX5 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cldnd1Q9CQX5 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cldnd1Q9CQX5 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Cldnd1Q9CQX5 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.57■□□□□ 0.08
Cldnd1Q9CQX5 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cldnd1Q9CQX5 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Cldnd1Q9CQX5 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cldnd1Q9CQX5 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cldnd1Q9CQX5 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cldnd1Q9CQX5 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cldnd1Q9CQX5 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC15.57■□□□□ 0.08
Cldnd1Q9CQX5 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cldnd1Q9CQX5 Gm28631-201ENSMUST00000190740 334 ntBASIC15.57■□□□□ 0.08
Cldnd1Q9CQX5 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cldnd1Q9CQX5 Gm6218-201ENSMUST00000219812 628 ntBASIC15.57■□□□□ 0.08
Cldnd1Q9CQX5 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Cldnd1Q9CQX5 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cldnd1Q9CQX5 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cldnd1Q9CQX5 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cldnd1Q9CQX5 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cldnd1Q9CQX5 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cldnd1Q9CQX5 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cldnd1Q9CQX5 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cldnd1Q9CQX5 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cldnd1Q9CQX5 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cldnd1Q9CQX5 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.56■□□□□ 0.08
Cldnd1Q9CQX5 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Cldnd1Q9CQX5 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Cldnd1Q9CQX5 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cldnd1Q9CQX5 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cldnd1Q9CQX5 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cldnd1Q9CQX5 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Cldnd1Q9CQX5 Gm15321-201ENSMUST00000121290 288 ntBASIC15.56■□□□□ 0.08
Cldnd1Q9CQX5 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC15.56■□□□□ 0.08
Cldnd1Q9CQX5 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC15.56■□□□□ 0.08
Cldnd1Q9CQX5 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC15.56■□□□□ 0.08
Cldnd1Q9CQX5 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC15.56■□□□□ 0.08
Cldnd1Q9CQX5 Klk2-ps-201ENSMUST00000205342 571 ntBASIC15.56■□□□□ 0.08
Cldnd1Q9CQX5 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cldnd1Q9CQX5 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cldnd1Q9CQX5 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cldnd1Q9CQX5 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cldnd1Q9CQX5 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Cldnd1Q9CQX5 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC15.56■□□□□ 0.08
Cldnd1Q9CQX5 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cldnd1Q9CQX5 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cldnd1Q9CQX5 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Cldnd1Q9CQX5 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cldnd1Q9CQX5 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cldnd1Q9CQX5 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cldnd1Q9CQX5 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cldnd1Q9CQX5 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cldnd1Q9CQX5 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cldnd1Q9CQX5 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Cldnd1Q9CQX5 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cldnd1Q9CQX5 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC15.55■□□□□ 0.08
Cldnd1Q9CQX5 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cldnd1Q9CQX5 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC15.55■□□□□ 0.08
Cldnd1Q9CQX5 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC15.55■□□□□ 0.08
Cldnd1Q9CQX5 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC15.55■□□□□ 0.08
Cldnd1Q9CQX5 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cldnd1Q9CQX5 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cldnd1Q9CQX5 Gm6745-201ENSMUST00000199216 526 ntBASIC15.55■□□□□ 0.08
Cldnd1Q9CQX5 AC154239.3-201ENSMUST00000226933 674 ntBASIC15.55■□□□□ 0.08
Cldnd1Q9CQX5 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cldnd1Q9CQX5 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cldnd1Q9CQX5 Gm25857-201ENSMUST00000082788 129 ntBASIC15.55■□□□□ 0.08
Cldnd1Q9CQX5 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cldnd1Q9CQX5 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.55■□□□□ 0.08
Cldnd1Q9CQX5 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cldnd1Q9CQX5 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.55■□□□□ 0.08
Cldnd1Q9CQX5 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cldnd1Q9CQX5 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cldnd1Q9CQX5 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cldnd1Q9CQX5 Gm45293-201ENSMUST00000209754 1812 ntBASIC15.54■□□□□ 0.08
Cldnd1Q9CQX5 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Cldnd1Q9CQX5 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
Cldnd1Q9CQX5 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cldnd1Q9CQX5 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cldnd1Q9CQX5 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cldnd1Q9CQX5 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cldnd1Q9CQX5 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cldnd1Q9CQX5 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cldnd1Q9CQX5 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC15.54■□□□□ 0.08
Cldnd1Q9CQX5 Gm4204-201ENSMUST00000110798 1231 ntBASIC15.54■□□□□ 0.08
Cldnd1Q9CQX5 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC15.54■□□□□ 0.08
Cldnd1Q9CQX5 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Cldnd1Q9CQX5 AC158529.1-201ENSMUST00000223618 239 ntBASIC15.54■□□□□ 0.08
Cldnd1Q9CQX5 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cldnd1Q9CQX5 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms