Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CCDC60Q8IWA6 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC20.16■□□□□ 0.82
CCDC60Q8IWA6 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC20.16■□□□□ 0.82
CCDC60Q8IWA6 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC20.16■□□□□ 0.82
CCDC60Q8IWA6 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CCDC60Q8IWA6 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CCDC60Q8IWA6 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC60Q8IWA6 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC60Q8IWA6 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC60Q8IWA6 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC20.16■□□□□ 0.82
CCDC60Q8IWA6 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.16■□□□□ 0.82
CCDC60Q8IWA6 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC60Q8IWA6 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC60Q8IWA6 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC60Q8IWA6 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CCDC60Q8IWA6 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC60Q8IWA6 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
CCDC60Q8IWA6 AL138781.2-201ENST00000617896 1843 ntBASIC20.16■□□□□ 0.82
CCDC60Q8IWA6 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC60Q8IWA6 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.15■□□□□ 0.82
CCDC60Q8IWA6 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC60Q8IWA6 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC60Q8IWA6 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC20.15■□□□□ 0.82
CCDC60Q8IWA6 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC60Q8IWA6 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC60Q8IWA6 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC20.15■□□□□ 0.82
CCDC60Q8IWA6 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC20.15■□□□□ 0.82
CCDC60Q8IWA6 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC20.15■□□□□ 0.82
CCDC60Q8IWA6 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC20.15■□□□□ 0.82
CCDC60Q8IWA6 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC60Q8IWA6 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC20.15■□□□□ 0.82
CCDC60Q8IWA6 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC60Q8IWA6 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC60Q8IWA6 AC093010.1-201ENST00000473625 1624 ntBASIC20.15■□□□□ 0.82
CCDC60Q8IWA6 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
CCDC60Q8IWA6 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC60Q8IWA6 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CCDC60Q8IWA6 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CCDC60Q8IWA6 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC60Q8IWA6 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CCDC60Q8IWA6 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CCDC60Q8IWA6 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.15■□□□□ 0.82
CCDC60Q8IWA6 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC60Q8IWA6 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC60Q8IWA6 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC60Q8IWA6 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC60Q8IWA6 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC60Q8IWA6 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC20.14■□□□□ 0.82
CCDC60Q8IWA6 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.14■□□□□ 0.81
CCDC60Q8IWA6 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.14■□□□□ 0.81
CCDC60Q8IWA6 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.14■□□□□ 0.81
CCDC60Q8IWA6 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC20.14■□□□□ 0.81
CCDC60Q8IWA6 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC60Q8IWA6 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC60Q8IWA6 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC60Q8IWA6 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC60Q8IWA6 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC60Q8IWA6 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC60Q8IWA6 AC004870.1-201ENST00000315132 882 ntBASIC20.14■□□□□ 0.81
CCDC60Q8IWA6 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC20.14■□□□□ 0.81
CCDC60Q8IWA6 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
CCDC60Q8IWA6 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC60Q8IWA6 AC026396.1-201ENST00000419388 421 ntBASIC20.14■□□□□ 0.81
CCDC60Q8IWA6 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC20.14■□□□□ 0.81
CCDC60Q8IWA6 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC20.14■□□□□ 0.81
CCDC60Q8IWA6 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC20.14■□□□□ 0.81
CCDC60Q8IWA6 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC20.14■□□□□ 0.81
CCDC60Q8IWA6 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC60Q8IWA6 IGHV3OR16-7-201ENST00000604106 360 ntBASIC20.14■□□□□ 0.81
CCDC60Q8IWA6 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.14■□□□□ 0.81
CCDC60Q8IWA6 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC60Q8IWA6 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC60Q8IWA6 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
CCDC60Q8IWA6 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
CCDC60Q8IWA6 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.14■□□□□ 0.81
CCDC60Q8IWA6 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC60Q8IWA6 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC60Q8IWA6 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
CCDC60Q8IWA6 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
CCDC60Q8IWA6 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC20.13■□□□□ 0.81
CCDC60Q8IWA6 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
CCDC60Q8IWA6 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC60Q8IWA6 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
CCDC60Q8IWA6 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC20.13■□□□□ 0.81
CCDC60Q8IWA6 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC60Q8IWA6 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.13■□□□□ 0.81
CCDC60Q8IWA6 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC60Q8IWA6 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC60Q8IWA6 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC60Q8IWA6 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC20.13■□□□□ 0.81
CCDC60Q8IWA6 AC096582.2-201ENST00000510860 516 ntBASIC20.13■□□□□ 0.81
CCDC60Q8IWA6 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC20.13■□□□□ 0.81
CCDC60Q8IWA6 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC60Q8IWA6 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
CCDC60Q8IWA6 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
CCDC60Q8IWA6 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC60Q8IWA6 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
CCDC60Q8IWA6 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC20.13■□□□□ 0.81
CCDC60Q8IWA6 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC60Q8IWA6 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms