Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Gm18737-201ENSMUST00000173594 937 ntBASIC19.69■□□□□ 0.74
Rab11fip3Q8CHD8 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC19.69■□□□□ 0.74
Rab11fip3Q8CHD8 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rab11fip3Q8CHD8 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC19.69■□□□□ 0.74
Rab11fip3Q8CHD8 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC19.69■□□□□ 0.74
Rab11fip3Q8CHD8 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC19.69■□□□□ 0.74
Rab11fip3Q8CHD8 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC19.69■□□□□ 0.74
Rab11fip3Q8CHD8 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rab11fip3Q8CHD8 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rab11fip3Q8CHD8 Nudt18-203ENSMUST00000228768 1578 ntBASIC19.69■□□□□ 0.74
Rab11fip3Q8CHD8 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rab11fip3Q8CHD8 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rab11fip3Q8CHD8 Zkscan3-208ENSMUST00000224820 5398 ntBASIC19.69■□□□□ 0.74
Rab11fip3Q8CHD8 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rab11fip3Q8CHD8 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rab11fip3Q8CHD8 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rab11fip3Q8CHD8 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rab11fip3Q8CHD8 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rab11fip3Q8CHD8 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rab11fip3Q8CHD8 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Rab11fip3Q8CHD8 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC19.68■□□□□ 0.74
Rab11fip3Q8CHD8 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rab11fip3Q8CHD8 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rab11fip3Q8CHD8 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rab11fip3Q8CHD8 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rab11fip3Q8CHD8 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rab11fip3Q8CHD8 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rab11fip3Q8CHD8 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
Rab11fip3Q8CHD8 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Rab11fip3Q8CHD8 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rab11fip3Q8CHD8 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC19.68■□□□□ 0.74
Rab11fip3Q8CHD8 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Rab11fip3Q8CHD8 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC19.68■□□□□ 0.74
Rab11fip3Q8CHD8 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rab11fip3Q8CHD8 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rab11fip3Q8CHD8 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rab11fip3Q8CHD8 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC19.68■□□□□ 0.74
Rab11fip3Q8CHD8 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rab11fip3Q8CHD8 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rab11fip3Q8CHD8 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Rab11fip3Q8CHD8 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Rab11fip3Q8CHD8 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rab11fip3Q8CHD8 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rab11fip3Q8CHD8 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rab11fip3Q8CHD8 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rab11fip3Q8CHD8 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rab11fip3Q8CHD8 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
Rab11fip3Q8CHD8 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
Rab11fip3Q8CHD8 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rab11fip3Q8CHD8 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
Rab11fip3Q8CHD8 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rab11fip3Q8CHD8 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Rab11fip3Q8CHD8 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Rab11fip3Q8CHD8 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rab11fip3Q8CHD8 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC19.67■□□□□ 0.74
Rab11fip3Q8CHD8 Gm15593-201ENSMUST00000122085 1008 ntBASIC19.67■□□□□ 0.74
Rab11fip3Q8CHD8 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rab11fip3Q8CHD8 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC19.67■□□□□ 0.74
Rab11fip3Q8CHD8 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rab11fip3Q8CHD8 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC19.67■□□□□ 0.74
Rab11fip3Q8CHD8 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC19.67■□□□□ 0.74
Rab11fip3Q8CHD8 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rab11fip3Q8CHD8 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rab11fip3Q8CHD8 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Rab11fip3Q8CHD8 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rab11fip3Q8CHD8 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rab11fip3Q8CHD8 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rab11fip3Q8CHD8 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC19.67■□□□□ 0.74
Rab11fip3Q8CHD8 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rab11fip3Q8CHD8 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC19.66■□□□□ 0.74
Rab11fip3Q8CHD8 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Rab11fip3Q8CHD8 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rab11fip3Q8CHD8 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rab11fip3Q8CHD8 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rab11fip3Q8CHD8 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rab11fip3Q8CHD8 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC19.66■□□□□ 0.74
Rab11fip3Q8CHD8 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC19.66■□□□□ 0.74
Rab11fip3Q8CHD8 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rab11fip3Q8CHD8 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC19.66■□□□□ 0.74
Rab11fip3Q8CHD8 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC19.66■□□□□ 0.74
Rab11fip3Q8CHD8 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC19.66■□□□□ 0.74
Rab11fip3Q8CHD8 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC19.66■□□□□ 0.74
Rab11fip3Q8CHD8 Gm44872-201ENSMUST00000207864 420 ntBASIC19.66■□□□□ 0.74
Rab11fip3Q8CHD8 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC19.66■□□□□ 0.74
Rab11fip3Q8CHD8 AC140397.2-201ENSMUST00000224213 834 ntBASIC19.66■□□□□ 0.74
Rab11fip3Q8CHD8 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rab11fip3Q8CHD8 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rab11fip3Q8CHD8 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rab11fip3Q8CHD8 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rab11fip3Q8CHD8 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rab11fip3Q8CHD8 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rab11fip3Q8CHD8 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rab11fip3Q8CHD8 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rab11fip3Q8CHD8 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rab11fip3Q8CHD8 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Rab11fip3Q8CHD8 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rab11fip3Q8CHD8 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC19.66■□□□□ 0.74
Rab11fip3Q8CHD8 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Rab11fip3Q8CHD8 App-207ENSMUST00000227737 2827 ntBASIC19.66■□□□□ 0.74
Rab11fip3Q8CHD8 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms