Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
Lhx1P63006 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.98□□□□□ -0.01
Lhx1P63006 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lhx1P63006 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.98□□□□□ -0.01
Lhx1P63006 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lhx1P63006 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Lhx1P63006 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC14.98□□□□□ -0.01
Lhx1P63006 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.98□□□□□ -0.01
Lhx1P63006 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lhx1P63006 Gm6736-201ENSMUST00000166583 948 ntBASIC14.98□□□□□ -0.01
Lhx1P63006 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Lhx1P63006 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lhx1P63006 Thap2-203ENSMUST00000218989 527 ntBASIC14.98□□□□□ -0.01
Lhx1P63006 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lhx1P63006 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lhx1P63006 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lhx1P63006 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lhx1P63006 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.98□□□□□ -0.01
Lhx1P63006 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lhx1P63006 Dancr-204ENSMUST00000132389 2347 ntBASIC14.98□□□□□ -0.01
Lhx1P63006 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Lhx1P63006 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.98□□□□□ -0.01
Lhx1P63006 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Lhx1P63006 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Lhx1P63006 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lhx1P63006 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.97□□□□□ -0.01
Lhx1P63006 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lhx1P63006 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lhx1P63006 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Lhx1P63006 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lhx1P63006 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Lhx1P63006 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lhx1P63006 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lhx1P63006 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Lhx1P63006 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Lhx1P63006 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lhx1P63006 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lhx1P63006 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Lhx1P63006 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lhx1P63006 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Lhx1P63006 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.97□□□□□ -0.01
Lhx1P63006 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lhx1P63006 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lhx1P63006 Gm5867-201ENSMUST00000063197 592 ntBASIC14.97□□□□□ -0.01
Lhx1P63006 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Lhx1P63006 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lhx1P63006 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.97□□□□□ -0.01
Lhx1P63006 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lhx1P63006 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.97□□□□□ -0.01
Lhx1P63006 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.97□□□□□ -0.01
Lhx1P63006 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lhx1P63006 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lhx1P63006 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lhx1P63006 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Lhx1P63006 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Lhx1P63006 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lhx1P63006 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lhx1P63006 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lhx1P63006 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lhx1P63006 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lhx1P63006 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lhx1P63006 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.97□□□□□ -0.01
Lhx1P63006 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Lhx1P63006 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
Lhx1P63006 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.97□□□□□ -0.01
Lhx1P63006 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lhx1P63006 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lhx1P63006 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Lhx1P63006 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.96□□□□□ -0.01
Lhx1P63006 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lhx1P63006 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lhx1P63006 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Lhx1P63006 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.96□□□□□ -0.01
Lhx1P63006 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.96□□□□□ -0.01
Lhx1P63006 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Lhx1P63006 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lhx1P63006 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.96□□□□□ -0.01
Lhx1P63006 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lhx1P63006 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
Lhx1P63006 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Lhx1P63006 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Lhx1P63006 Gm17968-201ENSMUST00000194902 784 ntBASIC14.96□□□□□ -0.01
Lhx1P63006 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.96□□□□□ -0.01
Lhx1P63006 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lhx1P63006 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lhx1P63006 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lhx1P63006 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.96□□□□□ -0.01
Lhx1P63006 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lhx1P63006 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lhx1P63006 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lhx1P63006 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.96□□□□□ -0.01
Lhx1P63006 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Lhx1P63006 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lhx1P63006 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lhx1P63006 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lhx1P63006 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lhx1P63006 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Lhx1P63006 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Lhx1P63006 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Lhx1P63006 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms