Protein–RNA interactions for Protein: P27790

Cenpb, Major centromere autoantigen B, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CenpbP27790 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CenpbP27790 Gm43205-201ENSMUST00000198622 1968 ntBASIC20.62■□□□□ 0.89
CenpbP27790 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CenpbP27790 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CenpbP27790 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CenpbP27790 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CenpbP27790 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CenpbP27790 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CenpbP27790 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
CenpbP27790 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CenpbP27790 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC20.61■□□□□ 0.89
CenpbP27790 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CenpbP27790 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC20.61■□□□□ 0.89
CenpbP27790 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CenpbP27790 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CenpbP27790 Gm45638-201ENSMUST00000211507 2878 ntBASIC20.61■□□□□ 0.89
CenpbP27790 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CenpbP27790 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CenpbP27790 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CenpbP27790 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CenpbP27790 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CenpbP27790 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CenpbP27790 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CenpbP27790 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CenpbP27790 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
CenpbP27790 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CenpbP27790 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CenpbP27790 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CenpbP27790 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CenpbP27790 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CenpbP27790 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CenpbP27790 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CenpbP27790 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
CenpbP27790 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC20.61■□□□□ 0.89
CenpbP27790 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CenpbP27790 Gm43061-201ENSMUST00000198850 2241 ntBASIC20.61■□□□□ 0.89
CenpbP27790 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CenpbP27790 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CenpbP27790 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC20.61■□□□□ 0.89
CenpbP27790 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC20.6■□□□□ 0.89
CenpbP27790 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CenpbP27790 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CenpbP27790 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CenpbP27790 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CenpbP27790 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CenpbP27790 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CenpbP27790 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CenpbP27790 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CenpbP27790 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CenpbP27790 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CenpbP27790 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CenpbP27790 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CenpbP27790 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CenpbP27790 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CenpbP27790 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
CenpbP27790 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CenpbP27790 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CenpbP27790 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CenpbP27790 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CenpbP27790 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CenpbP27790 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CenpbP27790 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CenpbP27790 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CenpbP27790 Gm12382-201ENSMUST00000122005 922 ntBASIC20.59■□□□□ 0.89
CenpbP27790 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CenpbP27790 Gm37292-201ENSMUST00000192062 758 ntBASIC20.59■□□□□ 0.89
CenpbP27790 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC20.59■□□□□ 0.89
CenpbP27790 AC166341.7-201ENSMUST00000221698 126 ntBASIC20.59■□□□□ 0.89
CenpbP27790 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CenpbP27790 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC20.59■□□□□ 0.89
CenpbP27790 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CenpbP27790 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CenpbP27790 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CenpbP27790 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CenpbP27790 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CenpbP27790 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CenpbP27790 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CenpbP27790 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CenpbP27790 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CenpbP27790 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
CenpbP27790 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CenpbP27790 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
CenpbP27790 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CenpbP27790 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CenpbP27790 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CenpbP27790 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CenpbP27790 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CenpbP27790 Gm45779-201ENSMUST00000212189 4064 ntBASIC20.58■□□□□ 0.89
CenpbP27790 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
CenpbP27790 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CenpbP27790 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
CenpbP27790 CT010444.2-201ENSMUST00000217877 1629 ntBASIC20.58■□□□□ 0.89
CenpbP27790 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC20.58■□□□□ 0.89
CenpbP27790 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC20.58■□□□□ 0.89
CenpbP27790 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC20.58■□□□□ 0.89
CenpbP27790 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
CenpbP27790 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
CenpbP27790 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
CenpbP27790 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
CenpbP27790 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms