Protein–RNA interactions for Protein: P10826

RARB, Retinoic acid receptor beta, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARBP10826 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.33■□□□□ 0.84
RARBP10826 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RARBP10826 SDHAP2-201ENST00000455183 2001 ntBASIC20.32■□□□□ 0.84
RARBP10826 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RARBP10826 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RARBP10826 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
RARBP10826 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC20.32■□□□□ 0.84
RARBP10826 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RARBP10826 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC20.32■□□□□ 0.84
RARBP10826 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC20.32■□□□□ 0.84
RARBP10826 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RARBP10826 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RARBP10826 FAM197Y3-203ENST00000618346 717 ntBASIC20.32■□□□□ 0.84
RARBP10826 AL691403.2-201ENST00000618460 490 ntBASIC20.32■□□□□ 0.84
RARBP10826 AC083906.6-201ENST00000641366 219 ntBASIC20.32■□□□□ 0.84
RARBP10826 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RARBP10826 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RARBP10826 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RARBP10826 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RARBP10826 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.32■□□□□ 0.84
RARBP10826 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RARBP10826 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RARBP10826 AL356309.3-201ENST00000624132 1934 ntBASIC20.31■□□□□ 0.84
RARBP10826 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RARBP10826 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RARBP10826 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.31■□□□□ 0.84
RARBP10826 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.31■□□□□ 0.84
RARBP10826 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RARBP10826 RAB17-203ENST00000409576 466 ntTSL 3 BASIC20.31■□□□□ 0.84
RARBP10826 AC092910.1-201ENST00000482027 1129 ntBASIC20.31■□□□□ 0.84
RARBP10826 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC20.31■□□□□ 0.84
RARBP10826 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC20.31■□□□□ 0.84
RARBP10826 OR7E14P-202ENST00000530490 1290 ntBASIC20.31■□□□□ 0.84
RARBP10826 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC20.31■□□□□ 0.84
RARBP10826 PNMT-203ENST00000581428 677 ntTSL 2 BASIC20.31■□□□□ 0.84
RARBP10826 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC20.31■□□□□ 0.84
RARBP10826 AC140113.2-201ENST00000604370 208 ntBASIC20.31■□□□□ 0.84
RARBP10826 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC20.31■□□□□ 0.84
RARBP10826 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.31■□□□□ 0.84
RARBP10826 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
RARBP10826 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RARBP10826 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RARBP10826 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RARBP10826 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.31■□□□□ 0.84
RARBP10826 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RARBP10826 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
RARBP10826 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RARBP10826 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RARBP10826 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RARBP10826 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RARBP10826 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
RARBP10826 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
RARBP10826 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
RARBP10826 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RARBP10826 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RARBP10826 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
RARBP10826 MYLKP1-201ENST00000509077 1580 ntBASIC20.3■□□□□ 0.84
RARBP10826 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RARBP10826 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.3■□□□□ 0.84
RARBP10826 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.3■□□□□ 0.84
RARBP10826 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
RARBP10826 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
RARBP10826 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RARBP10826 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC20.3■□□□□ 0.84
RARBP10826 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC20.3■□□□□ 0.84
RARBP10826 AL591424.1-201ENST00000442569 1213 ntBASIC20.3■□□□□ 0.84
RARBP10826 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC20.3■□□□□ 0.84
RARBP10826 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RARBP10826 AL356488.2-201ENST00000602755 427 ntBASIC20.3■□□□□ 0.84
RARBP10826 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RARBP10826 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
RARBP10826 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
RARBP10826 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RARBP10826 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RARBP10826 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RARBP10826 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RARBP10826 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RARBP10826 LINC00602-201ENST00000629776 2065 ntBASIC20.3■□□□□ 0.84
RARBP10826 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
RARBP10826 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
RARBP10826 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RARBP10826 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.29■□□□□ 0.84
RARBP10826 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC20.29■□□□□ 0.84
RARBP10826 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
RARBP10826 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RARBP10826 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RARBP10826 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RARBP10826 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC20.29■□□□□ 0.84
RARBP10826 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
RARBP10826 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RARBP10826 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.29■□□□□ 0.84
RARBP10826 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC20.29■□□□□ 0.84
RARBP10826 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RARBP10826 AC098831.1-202ENST00000438821 336 ntBASIC20.29■□□□□ 0.84
RARBP10826 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC20.29■□□□□ 0.84
RARBP10826 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC20.29■□□□□ 0.84
RARBP10826 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC20.29■□□□□ 0.84
RARBP10826 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC20.29■□□□□ 0.84
RARBP10826 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RARBP10826 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms