Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UbbP0CG49 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.31□□□□□ -0.28
UbbP0CG49 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UbbP0CG49 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UbbP0CG49 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UbbP0CG49 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UbbP0CG49 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UbbP0CG49 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
UbbP0CG49 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
UbbP0CG49 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
UbbP0CG49 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UbbP0CG49 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
UbbP0CG49 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.31□□□□□ -0.28
UbbP0CG49 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
UbbP0CG49 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
UbbP0CG49 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
UbbP0CG49 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
UbbP0CG49 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
UbbP0CG49 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC13.31□□□□□ -0.28
UbbP0CG49 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC13.31□□□□□ -0.28
UbbP0CG49 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC13.31□□□□□ -0.28
UbbP0CG49 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UbbP0CG49 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
UbbP0CG49 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
UbbP0CG49 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UbbP0CG49 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
UbbP0CG49 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC13.31□□□□□ -0.28
UbbP0CG49 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UbbP0CG49 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
UbbP0CG49 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.31□□□□□ -0.28
UbbP0CG49 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
UbbP0CG49 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.3□□□□□ -0.28
UbbP0CG49 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
UbbP0CG49 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
UbbP0CG49 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
UbbP0CG49 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UbbP0CG49 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UbbP0CG49 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UbbP0CG49 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.3□□□□□ -0.28
UbbP0CG49 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
UbbP0CG49 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
UbbP0CG49 Gm12134-201ENSMUST00000122109 520 ntBASIC13.3□□□□□ -0.28
UbbP0CG49 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
UbbP0CG49 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
UbbP0CG49 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC13.3□□□□□ -0.28
UbbP0CG49 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
UbbP0CG49 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
UbbP0CG49 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
UbbP0CG49 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
UbbP0CG49 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UbbP0CG49 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UbbP0CG49 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UbbP0CG49 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
UbbP0CG49 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UbbP0CG49 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
UbbP0CG49 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC13.3□□□□□ -0.28
UbbP0CG49 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UbbP0CG49 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UbbP0CG49 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.3□□□□□ -0.28
UbbP0CG49 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UbbP0CG49 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
UbbP0CG49 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UbbP0CG49 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
UbbP0CG49 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UbbP0CG49 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
UbbP0CG49 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UbbP0CG49 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
UbbP0CG49 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UbbP0CG49 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UbbP0CG49 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.29□□□□□ -0.28
UbbP0CG49 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
UbbP0CG49 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UbbP0CG49 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
UbbP0CG49 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
UbbP0CG49 Gm14722-201ENSMUST00000118943 689 ntBASIC13.29□□□□□ -0.28
UbbP0CG49 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC13.29□□□□□ -0.28
UbbP0CG49 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
UbbP0CG49 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UbbP0CG49 Krtap5-1-202ENSMUST00000188274 742 ntBASIC13.29□□□□□ -0.28
UbbP0CG49 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC13.29□□□□□ -0.28
UbbP0CG49 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC13.29□□□□□ -0.28
UbbP0CG49 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC13.29□□□□□ -0.28
UbbP0CG49 AC153881.2-201ENSMUST00000214877 204 ntBASIC13.29□□□□□ -0.28
UbbP0CG49 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
UbbP0CG49 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UbbP0CG49 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.29□□□□□ -0.28
UbbP0CG49 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UbbP0CG49 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
UbbP0CG49 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
UbbP0CG49 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
UbbP0CG49 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
UbbP0CG49 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UbbP0CG49 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
UbbP0CG49 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
UbbP0CG49 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
UbbP0CG49 Gm13337-201ENSMUST00000119183 1594 ntBASIC13.28□□□□□ -0.28
UbbP0CG49 Gm5049-201ENSMUST00000195878 1590 ntBASIC13.28□□□□□ -0.28
UbbP0CG49 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UbbP0CG49 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.28□□□□□ -0.28
UbbP0CG49 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms