Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TUBB4AP04350 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC19.5■□□□□ 0.71
TUBB4AP04350 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC19.5■□□□□ 0.71
TUBB4AP04350 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
TUBB4AP04350 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
TUBB4AP04350 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TUBB4AP04350 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.5■□□□□ 0.71
TUBB4AP04350 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.5■□□□□ 0.71
TUBB4AP04350 BX276092.2-201ENST00000417668 665 ntBASIC19.5■□□□□ 0.71
TUBB4AP04350 Z85996.1-201ENST00000494644 937 ntBASIC19.5■□□□□ 0.71
TUBB4AP04350 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.5■□□□□ 0.71
TUBB4AP04350 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.5■□□□□ 0.71
TUBB4AP04350 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC19.5■□□□□ 0.71
TUBB4AP04350 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TUBB4AP04350 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
TUBB4AP04350 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TUBB4AP04350 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TUBB4AP04350 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC19.5■□□□□ 0.71
TUBB4AP04350 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.5■□□□□ 0.71
TUBB4AP04350 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
TUBB4AP04350 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
TUBB4AP04350 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
TUBB4AP04350 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.49■□□□□ 0.71
TUBB4AP04350 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TUBB4AP04350 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
TUBB4AP04350 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TUBB4AP04350 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.49■□□□□ 0.71
TUBB4AP04350 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TUBB4AP04350 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TUBB4AP04350 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TUBB4AP04350 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TUBB4AP04350 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TUBB4AP04350 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.49■□□□□ 0.71
TUBB4AP04350 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.49■□□□□ 0.71
TUBB4AP04350 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.49■□□□□ 0.71
TUBB4AP04350 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.49■□□□□ 0.71
TUBB4AP04350 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TUBB4AP04350 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TUBB4AP04350 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TUBB4AP04350 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TUBB4AP04350 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TUBB4AP04350 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TUBB4AP04350 PCDHB19P-201ENST00000570871 2371 ntBASIC19.49■□□□□ 0.71
TUBB4AP04350 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TUBB4AP04350 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TUBB4AP04350 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TUBB4AP04350 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
TUBB4AP04350 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TUBB4AP04350 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
TUBB4AP04350 AC105020.1-201ENST00000435356 2205 ntBASIC19.48■□□□□ 0.71
TUBB4AP04350 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
TUBB4AP04350 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TUBB4AP04350 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TUBB4AP04350 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TUBB4AP04350 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TUBB4AP04350 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC19.48■□□□□ 0.71
TUBB4AP04350 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TUBB4AP04350 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TUBB4AP04350 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TUBB4AP04350 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TUBB4AP04350 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
TUBB4AP04350 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
TUBB4AP04350 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TUBB4AP04350 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.48■□□□□ 0.71
TUBB4AP04350 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.48■□□□□ 0.71
TUBB4AP04350 AC073111.5-205ENST00000641717 521 ntBASIC19.48■□□□□ 0.71
TUBB4AP04350 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TUBB4AP04350 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
TUBB4AP04350 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
TUBB4AP04350 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TUBB4AP04350 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TUBB4AP04350 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
TUBB4AP04350 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC19.48■□□□□ 0.71
TUBB4AP04350 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TUBB4AP04350 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TUBB4AP04350 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TUBB4AP04350 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TUBB4AP04350 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
TUBB4AP04350 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC19.47■□□□□ 0.71
TUBB4AP04350 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC19.47■□□□□ 0.71
TUBB4AP04350 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TUBB4AP04350 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
TUBB4AP04350 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TUBB4AP04350 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
TUBB4AP04350 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TUBB4AP04350 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.47■□□□□ 0.71
TUBB4AP04350 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.47■□□□□ 0.71
TUBB4AP04350 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.47■□□□□ 0.71
TUBB4AP04350 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
TUBB4AP04350 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.47■□□□□ 0.71
TUBB4AP04350 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
TUBB4AP04350 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.47■□□□□ 0.71
TUBB4AP04350 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.47■□□□□ 0.71
TUBB4AP04350 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.47■□□□□ 0.71
TUBB4AP04350 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
TUBB4AP04350 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.47■□□□□ 0.71
TUBB4AP04350 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC19.47■□□□□ 0.71
TUBB4AP04350 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
TUBB4AP04350 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TUBB4AP04350 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms