Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
HPS5Q9UPZ3 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
HPS5Q9UPZ3 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
HPS5Q9UPZ3 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC21.68■■□□□ 1.06
HPS5Q9UPZ3 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
HPS5Q9UPZ3 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
HPS5Q9UPZ3 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC21.68■■□□□ 1.06
HPS5Q9UPZ3 SAPCD2P3-201ENST00000455031 850 ntBASIC21.68■■□□□ 1.06
HPS5Q9UPZ3 RNPS1P1-201ENST00000507437 918 ntBASIC21.68■■□□□ 1.06
HPS5Q9UPZ3 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
HPS5Q9UPZ3 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC21.68■■□□□ 1.06
HPS5Q9UPZ3 ABR-204ENST00000543210 1049 ntTSL 2 BASIC21.68■■□□□ 1.06
HPS5Q9UPZ3 AC074051.2-201ENST00000565115 352 ntBASIC21.68■■□□□ 1.06
HPS5Q9UPZ3 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC21.68■■□□□ 1.06
HPS5Q9UPZ3 AC140113.2-201ENST00000604370 208 ntBASIC21.68■■□□□ 1.06
HPS5Q9UPZ3 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC21.68■■□□□ 1.06
HPS5Q9UPZ3 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
HPS5Q9UPZ3 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
HPS5Q9UPZ3 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HPS5Q9UPZ3 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC21.67■■□□□ 1.06
HPS5Q9UPZ3 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
HPS5Q9UPZ3 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC21.67■■□□□ 1.06
HPS5Q9UPZ3 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
HPS5Q9UPZ3 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
HPS5Q9UPZ3 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
HPS5Q9UPZ3 MADD-208ENST00000405573 1823 ntTSL 5 BASIC21.67■■□□□ 1.06
HPS5Q9UPZ3 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
HPS5Q9UPZ3 EFTUD1P1-204ENST00000560401 1798 ntBASIC21.67■■□□□ 1.06
HPS5Q9UPZ3 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HPS5Q9UPZ3 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
HPS5Q9UPZ3 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
HPS5Q9UPZ3 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC21.67■■□□□ 1.06
HPS5Q9UPZ3 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HPS5Q9UPZ3 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
HPS5Q9UPZ3 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
HPS5Q9UPZ3 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC21.67■■□□□ 1.06
HPS5Q9UPZ3 NAT14-202ENST00000587400 416 ntTSL 5 BASIC21.67■■□□□ 1.06
HPS5Q9UPZ3 AC055717.3-201ENST00000622967 595 ntBASIC21.67■■□□□ 1.06
HPS5Q9UPZ3 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
HPS5Q9UPZ3 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC21.67■■□□□ 1.06
HPS5Q9UPZ3 BICD1-207ENST00000551848 1962 ntBASIC21.67■■□□□ 1.06
HPS5Q9UPZ3 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC21.66■■□□□ 1.06
HPS5Q9UPZ3 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC21.66■■□□□ 1.06
HPS5Q9UPZ3 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
HPS5Q9UPZ3 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HPS5Q9UPZ3 AC099343.3-201ENST00000605834 2503 ntBASIC21.66■■□□□ 1.06
HPS5Q9UPZ3 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
HPS5Q9UPZ3 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
HPS5Q9UPZ3 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
HPS5Q9UPZ3 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
HPS5Q9UPZ3 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
HPS5Q9UPZ3 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC21.66■■□□□ 1.06
HPS5Q9UPZ3 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
HPS5Q9UPZ3 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HPS5Q9UPZ3 AC079602.3-201ENST00000623931 403 ntBASIC21.66■■□□□ 1.06
HPS5Q9UPZ3 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HPS5Q9UPZ3 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC21.66■■□□□ 1.06
HPS5Q9UPZ3 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
HPS5Q9UPZ3 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC21.66■■□□□ 1.06
HPS5Q9UPZ3 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
HPS5Q9UPZ3 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
HPS5Q9UPZ3 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
HPS5Q9UPZ3 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HPS5Q9UPZ3 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
HPS5Q9UPZ3 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
HPS5Q9UPZ3 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
HPS5Q9UPZ3 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
HPS5Q9UPZ3 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC21.65■■□□□ 1.06
HPS5Q9UPZ3 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HPS5Q9UPZ3 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HPS5Q9UPZ3 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC21.65■■□□□ 1.06
HPS5Q9UPZ3 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HPS5Q9UPZ3 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.65■■□□□ 1.06
HPS5Q9UPZ3 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
HPS5Q9UPZ3 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HPS5Q9UPZ3 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC21.65■■□□□ 1.06
HPS5Q9UPZ3 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC21.65■■□□□ 1.06
HPS5Q9UPZ3 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC21.65■■□□□ 1.06
HPS5Q9UPZ3 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC21.65■■□□□ 1.06
HPS5Q9UPZ3 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC21.65■■□□□ 1.06
HPS5Q9UPZ3 AF238378.1-201ENST00000526806 358 ntBASIC21.65■■□□□ 1.06
HPS5Q9UPZ3 AC099336.1-202ENST00000602961 463 ntBASIC21.65■■□□□ 1.06
HPS5Q9UPZ3 AC024243.1-201ENST00000609234 778 ntBASIC21.65■■□□□ 1.06
HPS5Q9UPZ3 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
HPS5Q9UPZ3 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
HPS5Q9UPZ3 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
HPS5Q9UPZ3 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
HPS5Q9UPZ3 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HPS5Q9UPZ3 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HPS5Q9UPZ3 CYP51A1P1-201ENST00000492267 1507 ntBASIC21.65■■□□□ 1.06
HPS5Q9UPZ3 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
HPS5Q9UPZ3 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
HPS5Q9UPZ3 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
HPS5Q9UPZ3 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC21.64■■□□□ 1.06
HPS5Q9UPZ3 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC21.64■■□□□ 1.06
HPS5Q9UPZ3 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.06
HPS5Q9UPZ3 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
HPS5Q9UPZ3 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC21.64■■□□□ 1.05
HPS5Q9UPZ3 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC21.64■■□□□ 1.05
HPS5Q9UPZ3 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms