Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NDE1Q9NXR1 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NDE1Q9NXR1 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NDE1Q9NXR1 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NDE1Q9NXR1 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.66■□□□□ 0.42
NDE1Q9NXR1 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.66■□□□□ 0.42
NDE1Q9NXR1 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.66■□□□□ 0.42
NDE1Q9NXR1 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.66■□□□□ 0.42
NDE1Q9NXR1 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NDE1Q9NXR1 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
NDE1Q9NXR1 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NDE1Q9NXR1 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NDE1Q9NXR1 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.66■□□□□ 0.42
NDE1Q9NXR1 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
NDE1Q9NXR1 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NDE1Q9NXR1 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
NDE1Q9NXR1 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.66■□□□□ 0.42
NDE1Q9NXR1 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NDE1Q9NXR1 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
NDE1Q9NXR1 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NDE1Q9NXR1 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NDE1Q9NXR1 AL121761.2-201ENST00000598007 1648 ntBASIC17.65■□□□□ 0.42
NDE1Q9NXR1 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.65■□□□□ 0.42
NDE1Q9NXR1 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NDE1Q9NXR1 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NDE1Q9NXR1 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NDE1Q9NXR1 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NDE1Q9NXR1 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.65■□□□□ 0.42
NDE1Q9NXR1 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.65■□□□□ 0.42
NDE1Q9NXR1 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
NDE1Q9NXR1 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NDE1Q9NXR1 AP000593.1-201ENST00000393668 712 ntBASIC17.65■□□□□ 0.42
NDE1Q9NXR1 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.65■□□□□ 0.42
NDE1Q9NXR1 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.65■□□□□ 0.42
NDE1Q9NXR1 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC17.65■□□□□ 0.42
NDE1Q9NXR1 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC17.65■□□□□ 0.42
NDE1Q9NXR1 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NDE1Q9NXR1 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.65■□□□□ 0.42
NDE1Q9NXR1 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.65■□□□□ 0.42
NDE1Q9NXR1 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NDE1Q9NXR1 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NDE1Q9NXR1 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
NDE1Q9NXR1 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
NDE1Q9NXR1 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
NDE1Q9NXR1 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
NDE1Q9NXR1 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NDE1Q9NXR1 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
NDE1Q9NXR1 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NDE1Q9NXR1 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NDE1Q9NXR1 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
NDE1Q9NXR1 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.65■□□□□ 0.42
NDE1Q9NXR1 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.65■□□□□ 0.42
NDE1Q9NXR1 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
NDE1Q9NXR1 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.65■□□□□ 0.42
NDE1Q9NXR1 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
NDE1Q9NXR1 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.64■□□□□ 0.42
NDE1Q9NXR1 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
NDE1Q9NXR1 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
NDE1Q9NXR1 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
NDE1Q9NXR1 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NDE1Q9NXR1 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
NDE1Q9NXR1 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
NDE1Q9NXR1 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
NDE1Q9NXR1 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.64■□□□□ 0.41
NDE1Q9NXR1 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
NDE1Q9NXR1 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NDE1Q9NXR1 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.64■□□□□ 0.41
NDE1Q9NXR1 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.64■□□□□ 0.41
NDE1Q9NXR1 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.64■□□□□ 0.41
NDE1Q9NXR1 AC091874.3-201ENST00000512672 1195 ntBASIC17.64■□□□□ 0.41
NDE1Q9NXR1 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.64■□□□□ 0.41
NDE1Q9NXR1 AC092118.2-201ENST00000613495 667 ntBASIC17.64■□□□□ 0.41
NDE1Q9NXR1 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NDE1Q9NXR1 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
NDE1Q9NXR1 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.64■□□□□ 0.41
NDE1Q9NXR1 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.64■□□□□ 0.41
NDE1Q9NXR1 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NDE1Q9NXR1 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
NDE1Q9NXR1 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NDE1Q9NXR1 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
NDE1Q9NXR1 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NDE1Q9NXR1 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.63■□□□□ 0.41
NDE1Q9NXR1 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.63■□□□□ 0.41
NDE1Q9NXR1 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.63■□□□□ 0.41
NDE1Q9NXR1 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.63■□□□□ 0.41
NDE1Q9NXR1 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NDE1Q9NXR1 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
NDE1Q9NXR1 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.63■□□□□ 0.41
NDE1Q9NXR1 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
NDE1Q9NXR1 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NDE1Q9NXR1 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
NDE1Q9NXR1 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NDE1Q9NXR1 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NDE1Q9NXR1 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NDE1Q9NXR1 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NDE1Q9NXR1 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NDE1Q9NXR1 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.63■□□□□ 0.41
NDE1Q9NXR1 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.63■□□□□ 0.41
NDE1Q9NXR1 PRKY-204ENST00000533551 1019 ntBASIC17.63■□□□□ 0.41
NDE1Q9NXR1 PNMA6B-201ENST00000538162 1200 ntBASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms