Protein–RNA interactions for Protein: Q9H8M2

BRD9, Bromodomain-containing protein 9, humanhuman

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9Q9H8M2 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRD9Q9H8M2 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.78■□□□□ 0.6
BRD9Q9H8M2 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.78■□□□□ 0.6
BRD9Q9H8M2 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BRD9Q9H8M2 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.78■□□□□ 0.6
BRD9Q9H8M2 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
BRD9Q9H8M2 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.78■□□□□ 0.6
BRD9Q9H8M2 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
BRD9Q9H8M2 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRD9Q9H8M2 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRD9Q9H8M2 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BRD9Q9H8M2 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRD9Q9H8M2 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BRD9Q9H8M2 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.78■□□□□ 0.6
BRD9Q9H8M2 MIR149-201ENST00000384879 89 ntBASIC18.78■□□□□ 0.6
BRD9Q9H8M2 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.78■□□□□ 0.6
BRD9Q9H8M2 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRD9Q9H8M2 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BRD9Q9H8M2 KRT18P58-201ENST00000527480 1120 ntBASIC18.78■□□□□ 0.6
BRD9Q9H8M2 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.78■□□□□ 0.6
BRD9Q9H8M2 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.78■□□□□ 0.6
BRD9Q9H8M2 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.78■□□□□ 0.6
BRD9Q9H8M2 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.78■□□□□ 0.6
BRD9Q9H8M2 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.78■□□□□ 0.6
BRD9Q9H8M2 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BRD9Q9H8M2 AC083906.6-201ENST00000641366 219 ntBASIC18.78■□□□□ 0.6
BRD9Q9H8M2 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRD9Q9H8M2 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRD9Q9H8M2 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRD9Q9H8M2 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.78■□□□□ 0.6
BRD9Q9H8M2 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BRD9Q9H8M2 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
BRD9Q9H8M2 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.77■□□□□ 0.6
BRD9Q9H8M2 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BRD9Q9H8M2 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.77■□□□□ 0.6
BRD9Q9H8M2 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.77■□□□□ 0.6
BRD9Q9H8M2 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.77■□□□□ 0.6
BRD9Q9H8M2 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
BRD9Q9H8M2 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
BRD9Q9H8M2 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
BRD9Q9H8M2 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BRD9Q9H8M2 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
BRD9Q9H8M2 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.77■□□□□ 0.6
BRD9Q9H8M2 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BRD9Q9H8M2 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.77■□□□□ 0.6
BRD9Q9H8M2 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
BRD9Q9H8M2 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
BRD9Q9H8M2 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BRD9Q9H8M2 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
BRD9Q9H8M2 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.77■□□□□ 0.6
BRD9Q9H8M2 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.77■□□□□ 0.6
BRD9Q9H8M2 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BRD9Q9H8M2 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.77■□□□□ 0.6
BRD9Q9H8M2 AC113404.2-201ENST00000507884 177 ntBASIC18.77■□□□□ 0.6
BRD9Q9H8M2 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
BRD9Q9H8M2 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
BRD9Q9H8M2 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BRD9Q9H8M2 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BRD9Q9H8M2 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BRD9Q9H8M2 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.77■□□□□ 0.59
BRD9Q9H8M2 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
BRD9Q9H8M2 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
BRD9Q9H8M2 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.76■□□□□ 0.59
BRD9Q9H8M2 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
BRD9Q9H8M2 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
BRD9Q9H8M2 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.76■□□□□ 0.59
BRD9Q9H8M2 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BRD9Q9H8M2 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
BRD9Q9H8M2 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.76■□□□□ 0.59
BRD9Q9H8M2 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.76■□□□□ 0.59
BRD9Q9H8M2 RNPS1P1-201ENST00000507437 918 ntBASIC18.76■□□□□ 0.59
BRD9Q9H8M2 AC073648.2-201ENST00000510116 352 ntBASIC18.76■□□□□ 0.59
BRD9Q9H8M2 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18.76■□□□□ 0.59
BRD9Q9H8M2 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
BRD9Q9H8M2 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.76■□□□□ 0.59
BRD9Q9H8M2 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
BRD9Q9H8M2 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
BRD9Q9H8M2 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.76■□□□□ 0.59
BRD9Q9H8M2 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.76■□□□□ 0.59
BRD9Q9H8M2 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BRD9Q9H8M2 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.76■□□□□ 0.59
BRD9Q9H8M2 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.76■□□□□ 0.59
BRD9Q9H8M2 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BRD9Q9H8M2 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.76■□□□□ 0.59
BRD9Q9H8M2 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.76■□□□□ 0.59
BRD9Q9H8M2 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.75■□□□□ 0.59
BRD9Q9H8M2 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
BRD9Q9H8M2 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
BRD9Q9H8M2 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.75■□□□□ 0.59
BRD9Q9H8M2 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
BRD9Q9H8M2 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
BRD9Q9H8M2 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
BRD9Q9H8M2 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
BRD9Q9H8M2 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
BRD9Q9H8M2 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
BRD9Q9H8M2 RCN1P2-201ENST00000398357 915 ntBASIC18.75■□□□□ 0.59
BRD9Q9H8M2 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
BRD9Q9H8M2 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.75■□□□□ 0.59
BRD9Q9H8M2 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.75■□□□□ 0.59
BRD9Q9H8M2 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms