Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.33□□□□□ -0.12
Nkx6-1Q99MA9 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Nkx6-1Q99MA9 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
Nkx6-1Q99MA9 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.33□□□□□ -0.12
Nkx6-1Q99MA9 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx6-1Q99MA9 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.33□□□□□ -0.12
Nkx6-1Q99MA9 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx6-1Q99MA9 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx6-1Q99MA9 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC14.33□□□□□ -0.12
Nkx6-1Q99MA9 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx6-1Q99MA9 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx6-1Q99MA9 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC14.33□□□□□ -0.12
Nkx6-1Q99MA9 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx6-1Q99MA9 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx6-1Q99MA9 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx6-1Q99MA9 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Nkx6-1Q99MA9 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx6-1Q99MA9 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx6-1Q99MA9 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx6-1Q99MA9 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx6-1Q99MA9 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx6-1Q99MA9 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx6-1Q99MA9 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx6-1Q99MA9 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx6-1Q99MA9 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Nkx6-1Q99MA9 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx6-1Q99MA9 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx6-1Q99MA9 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx6-1Q99MA9 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx6-1Q99MA9 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Nkx6-1Q99MA9 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx6-1Q99MA9 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.32□□□□□ -0.12
Nkx6-1Q99MA9 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Nkx6-1Q99MA9 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx6-1Q99MA9 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx6-1Q99MA9 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx6-1Q99MA9 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Nkx6-1Q99MA9 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx6-1Q99MA9 Gm13453-201ENSMUST00000118708 357 ntBASIC14.32□□□□□ -0.12
Nkx6-1Q99MA9 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.32□□□□□ -0.12
Nkx6-1Q99MA9 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.32□□□□□ -0.12
Nkx6-1Q99MA9 Gm10499-201ENSMUST00000174094 934 ntBASIC14.32□□□□□ -0.12
Nkx6-1Q99MA9 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx6-1Q99MA9 Gm8318-201ENSMUST00000182954 872 ntBASIC14.32□□□□□ -0.12
Nkx6-1Q99MA9 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx6-1Q99MA9 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx6-1Q99MA9 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.32□□□□□ -0.12
Nkx6-1Q99MA9 Gm6888-201ENSMUST00000221983 706 ntBASIC14.32□□□□□ -0.12
Nkx6-1Q99MA9 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Nkx6-1Q99MA9 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx6-1Q99MA9 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.32□□□□□ -0.12
Nkx6-1Q99MA9 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Nkx6-1Q99MA9 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx6-1Q99MA9 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx6-1Q99MA9 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx6-1Q99MA9 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx6-1Q99MA9 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx6-1Q99MA9 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Nkx6-1Q99MA9 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx6-1Q99MA9 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx6-1Q99MA9 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx6-1Q99MA9 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx6-1Q99MA9 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx6-1Q99MA9 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx6-1Q99MA9 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx6-1Q99MA9 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx6-1Q99MA9 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx6-1Q99MA9 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Nkx6-1Q99MA9 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Nkx6-1Q99MA9 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Nkx6-1Q99MA9 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx6-1Q99MA9 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx6-1Q99MA9 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx6-1Q99MA9 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx6-1Q99MA9 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx6-1Q99MA9 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx6-1Q99MA9 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
Nkx6-1Q99MA9 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.31□□□□□ -0.12
Nkx6-1Q99MA9 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx6-1Q99MA9 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC14.31□□□□□ -0.12
Nkx6-1Q99MA9 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.31□□□□□ -0.12
Nkx6-1Q99MA9 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC14.31□□□□□ -0.12
Nkx6-1Q99MA9 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx6-1Q99MA9 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx6-1Q99MA9 Mir7684-201ENSMUST00000183858 60 ntBASIC14.31□□□□□ -0.12
Nkx6-1Q99MA9 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Nkx6-1Q99MA9 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx6-1Q99MA9 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx6-1Q99MA9 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx6-1Q99MA9 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Nkx6-1Q99MA9 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx6-1Q99MA9 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Nkx6-1Q99MA9 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx6-1Q99MA9 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx6-1Q99MA9 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx6-1Q99MA9 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx6-1Q99MA9 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx6-1Q99MA9 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx6-1Q99MA9 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx6-1Q99MA9 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms