Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC19.31■□□□□ 0.68
ZNF558Q96NG5 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC19.31■□□□□ 0.68
ZNF558Q96NG5 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF558Q96NG5 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF558Q96NG5 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF558Q96NG5 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
ZNF558Q96NG5 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF558Q96NG5 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.31■□□□□ 0.68
ZNF558Q96NG5 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
ZNF558Q96NG5 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF558Q96NG5 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.3■□□□□ 0.68
ZNF558Q96NG5 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF558Q96NG5 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC19.3■□□□□ 0.68
ZNF558Q96NG5 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF558Q96NG5 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF558Q96NG5 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF558Q96NG5 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF558Q96NG5 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF558Q96NG5 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF558Q96NG5 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF558Q96NG5 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC19.3■□□□□ 0.68
ZNF558Q96NG5 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC19.3■□□□□ 0.68
ZNF558Q96NG5 SART3-203ENST00000546611 1184 ntBASIC19.3■□□□□ 0.68
ZNF558Q96NG5 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC19.3■□□□□ 0.68
ZNF558Q96NG5 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC19.3■□□□□ 0.68
ZNF558Q96NG5 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC19.3■□□□□ 0.68
ZNF558Q96NG5 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF558Q96NG5 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC19.3■□□□□ 0.68
ZNF558Q96NG5 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.3■□□□□ 0.68
ZNF558Q96NG5 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC19.3■□□□□ 0.68
ZNF558Q96NG5 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC19.3■□□□□ 0.68
ZNF558Q96NG5 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF558Q96NG5 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
ZNF558Q96NG5 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.29■□□□□ 0.68
ZNF558Q96NG5 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF558Q96NG5 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF558Q96NG5 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
ZNF558Q96NG5 FABP5-202ENST00000396359 986 ntTSL 5 BASIC19.29■□□□□ 0.68
ZNF558Q96NG5 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC19.29■□□□□ 0.68
ZNF558Q96NG5 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.29■□□□□ 0.68
ZNF558Q96NG5 AC112698.1-201ENST00000510299 916 ntBASIC19.29■□□□□ 0.68
ZNF558Q96NG5 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF558Q96NG5 CAND2-206ENST00000626378 333 ntTSL 5 BASIC19.29■□□□□ 0.68
ZNF558Q96NG5 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC19.29■□□□□ 0.68
ZNF558Q96NG5 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
ZNF558Q96NG5 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF558Q96NG5 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF558Q96NG5 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC19.29■□□□□ 0.68
ZNF558Q96NG5 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC19.29■□□□□ 0.68
ZNF558Q96NG5 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF558Q96NG5 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC19.29■□□□□ 0.68
ZNF558Q96NG5 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF558Q96NG5 AL356309.3-201ENST00000624132 1934 ntBASIC19.29■□□□□ 0.68
ZNF558Q96NG5 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.28■□□□□ 0.68
ZNF558Q96NG5 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF558Q96NG5 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.28■□□□□ 0.68
ZNF558Q96NG5 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF558Q96NG5 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF558Q96NG5 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
ZNF558Q96NG5 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF558Q96NG5 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF558Q96NG5 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF558Q96NG5 MIR1233-2-201ENST00000408138 82 ntBASIC19.28■□□□□ 0.68
ZNF558Q96NG5 MIR1233-1-201ENST00000408722 82 ntBASIC19.28■□□□□ 0.68
ZNF558Q96NG5 RPS2P1-201ENST00000434010 821 ntBASIC19.28■□□□□ 0.68
ZNF558Q96NG5 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC19.28■□□□□ 0.68
ZNF558Q96NG5 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
ZNF558Q96NG5 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF558Q96NG5 PAM16-208ENST00000573553 722 ntTSL 2 BASIC19.28■□□□□ 0.68
ZNF558Q96NG5 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC19.28■□□□□ 0.68
ZNF558Q96NG5 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.28■□□□□ 0.68
ZNF558Q96NG5 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF558Q96NG5 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
ZNF558Q96NG5 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.28■□□□□ 0.68
ZNF558Q96NG5 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC19.28■□□□□ 0.68
ZNF558Q96NG5 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF558Q96NG5 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF558Q96NG5 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF558Q96NG5 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.28■□□□□ 0.68
ZNF558Q96NG5 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF558Q96NG5 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC19.28■□□□□ 0.68
ZNF558Q96NG5 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.28■□□□□ 0.68
ZNF558Q96NG5 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
ZNF558Q96NG5 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC19.27■□□□□ 0.68
ZNF558Q96NG5 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF558Q96NG5 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
ZNF558Q96NG5 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF558Q96NG5 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF558Q96NG5 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF558Q96NG5 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF558Q96NG5 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC19.27■□□□□ 0.68
ZNF558Q96NG5 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC19.27■□□□□ 0.68
ZNF558Q96NG5 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF558Q96NG5 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF558Q96NG5 BX842568.4-201ENST00000421222 227 ntBASIC19.27■□□□□ 0.68
ZNF558Q96NG5 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF558Q96NG5 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.27■□□□□ 0.68
ZNF558Q96NG5 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.27■□□□□ 0.68
ZNF558Q96NG5 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
ZNF558Q96NG5 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms