Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC13.94□□□□□ -0.18
LINC00479Q96M42 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00479Q96M42 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
LINC00479Q96M42 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00479Q96M42 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC13.94□□□□□ -0.18
LINC00479Q96M42 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00479Q96M42 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00479Q96M42 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
LINC00479Q96M42 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00479Q96M42 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC13.94□□□□□ -0.18
LINC00479Q96M42 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00479Q96M42 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
LINC00479Q96M42 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
LINC00479Q96M42 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00479Q96M42 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00479Q96M42 SLC29A4P1-201ENST00000398760 971 ntBASIC13.94□□□□□ -0.18
LINC00479Q96M42 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00479Q96M42 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC13.94□□□□□ -0.18
LINC00479Q96M42 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC13.94□□□□□ -0.18
LINC00479Q96M42 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC13.94□□□□□ -0.18
LINC00479Q96M42 GLRB-205ENST00000512619 728 ntTSL 3 BASIC13.94□□□□□ -0.18
LINC00479Q96M42 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC13.94□□□□□ -0.18
LINC00479Q96M42 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC13.94□□□□□ -0.18
LINC00479Q96M42 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC13.94□□□□□ -0.18
LINC00479Q96M42 VPS53-216ENST00000574029 585 ntTSL 4 BASIC13.94□□□□□ -0.18
LINC00479Q96M42 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC13.94□□□□□ -0.18
LINC00479Q96M42 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
LINC00479Q96M42 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00479Q96M42 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00479Q96M42 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC13.94□□□□□ -0.18
LINC00479Q96M42 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00479Q96M42 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00479Q96M42 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC13.94□□□□□ -0.18
LINC00479Q96M42 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
LINC00479Q96M42 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00479Q96M42 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
LINC00479Q96M42 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00479Q96M42 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC13.94□□□□□ -0.18
LINC00479Q96M42 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00479Q96M42 AL023806.1-201ENST00000603994 1649 ntBASIC13.93□□□□□ -0.18
LINC00479Q96M42 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00479Q96M42 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00479Q96M42 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
LINC00479Q96M42 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
LINC00479Q96M42 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00479Q96M42 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC13.93□□□□□ -0.18
LINC00479Q96M42 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00479Q96M42 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00479Q96M42 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00479Q96M42 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00479Q96M42 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00479Q96M42 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00479Q96M42 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00479Q96M42 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00479Q96M42 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00479Q96M42 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC13.93□□□□□ -0.18
LINC00479Q96M42 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00479Q96M42 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00479Q96M42 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00479Q96M42 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00479Q96M42 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC13.93□□□□□ -0.18
LINC00479Q96M42 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00479Q96M42 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC13.93□□□□□ -0.18
LINC00479Q96M42 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC13.93□□□□□ -0.18
LINC00479Q96M42 GUSBP6-202ENST00000438529 1198 ntBASIC13.93□□□□□ -0.18
LINC00479Q96M42 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC13.93□□□□□ -0.18
LINC00479Q96M42 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00479Q96M42 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC13.93□□□□□ -0.18
LINC00479Q96M42 MNT-208ENST00000575394 606 ntTSL 4 BASIC13.93□□□□□ -0.18
LINC00479Q96M42 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
LINC00479Q96M42 AC083880.1-201ENST00000608266 535 ntBASIC13.93□□□□□ -0.18
LINC00479Q96M42 IKBKGP1-201ENST00000612193 1073 ntBASIC13.93□□□□□ -0.18
LINC00479Q96M42 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
LINC00479Q96M42 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC13.93□□□□□ -0.18
LINC00479Q96M42 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00479Q96M42 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
LINC00479Q96M42 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00479Q96M42 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC13.93□□□□□ -0.18
LINC00479Q96M42 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00479Q96M42 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00479Q96M42 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00479Q96M42 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00479Q96M42 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00479Q96M42 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00479Q96M42 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00479Q96M42 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00479Q96M42 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC13.93□□□□□ -0.18
LINC00479Q96M42 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC13.93□□□□□ -0.18
LINC00479Q96M42 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00479Q96M42 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
LINC00479Q96M42 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
LINC00479Q96M42 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00479Q96M42 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
LINC00479Q96M42 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00479Q96M42 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC13.93□□□□□ -0.18
LINC00479Q96M42 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00479Q96M42 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00479Q96M42 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00479Q96M42 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00479Q96M42 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms