Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LMO3Q8TAP4 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
LMO3Q8TAP4 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
LMO3Q8TAP4 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
LMO3Q8TAP4 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LMO3Q8TAP4 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LMO3Q8TAP4 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.52■□□□□ 0.72
LMO3Q8TAP4 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.52■□□□□ 0.72
LMO3Q8TAP4 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.52■□□□□ 0.72
LMO3Q8TAP4 RN7SL850P-201ENST00000579959 291 ntBASIC19.52■□□□□ 0.72
LMO3Q8TAP4 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
LMO3Q8TAP4 PCDHB18P-201ENST00000524813 2368 ntBASIC19.52■□□□□ 0.72
LMO3Q8TAP4 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LMO3Q8TAP4 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.52■□□□□ 0.72
LMO3Q8TAP4 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
LMO3Q8TAP4 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LMO3Q8TAP4 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LMO3Q8TAP4 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
LMO3Q8TAP4 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
LMO3Q8TAP4 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
LMO3Q8TAP4 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
LMO3Q8TAP4 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.52■□□□□ 0.71
LMO3Q8TAP4 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.52■□□□□ 0.71
LMO3Q8TAP4 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.71
LMO3Q8TAP4 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
LMO3Q8TAP4 LINC00602-201ENST00000629776 2065 ntBASIC19.52■□□□□ 0.71
LMO3Q8TAP4 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LMO3Q8TAP4 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.51■□□□□ 0.71
LMO3Q8TAP4 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LMO3Q8TAP4 HBZP1-201ENST00000354915 429 ntBASIC19.51■□□□□ 0.71
LMO3Q8TAP4 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LMO3Q8TAP4 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.51■□□□□ 0.71
LMO3Q8TAP4 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.51■□□□□ 0.71
LMO3Q8TAP4 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.51■□□□□ 0.71
LMO3Q8TAP4 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.51■□□□□ 0.71
LMO3Q8TAP4 AC006116.8-202ENST00000587620 1550 ntBASIC19.51■□□□□ 0.71
LMO3Q8TAP4 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LMO3Q8TAP4 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LMO3Q8TAP4 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.51■□□□□ 0.71
LMO3Q8TAP4 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.51■□□□□ 0.71
LMO3Q8TAP4 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
LMO3Q8TAP4 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
LMO3Q8TAP4 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LMO3Q8TAP4 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.51■□□□□ 0.71
LMO3Q8TAP4 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LMO3Q8TAP4 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LMO3Q8TAP4 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LMO3Q8TAP4 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LMO3Q8TAP4 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.5■□□□□ 0.71
LMO3Q8TAP4 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.5■□□□□ 0.71
LMO3Q8TAP4 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.5■□□□□ 0.71
LMO3Q8TAP4 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.5■□□□□ 0.71
LMO3Q8TAP4 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
LMO3Q8TAP4 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LMO3Q8TAP4 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LMO3Q8TAP4 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LMO3Q8TAP4 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.5■□□□□ 0.71
LMO3Q8TAP4 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LMO3Q8TAP4 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LMO3Q8TAP4 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LMO3Q8TAP4 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.5■□□□□ 0.71
LMO3Q8TAP4 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
LMO3Q8TAP4 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.5■□□□□ 0.71
LMO3Q8TAP4 SPDYE13P-201ENST00000445314 798 ntBASIC19.5■□□□□ 0.71
LMO3Q8TAP4 HOMER2P1-201ENST00000455653 964 ntBASIC19.5■□□□□ 0.71
LMO3Q8TAP4 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
LMO3Q8TAP4 AC063952.2-201ENST00000498792 1227 ntBASIC19.5■□□□□ 0.71
LMO3Q8TAP4 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.5■□□□□ 0.71
LMO3Q8TAP4 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.5■□□□□ 0.71
LMO3Q8TAP4 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.5■□□□□ 0.71
LMO3Q8TAP4 AC008687.5-201ENST00000593746 558 ntBASIC19.5■□□□□ 0.71
LMO3Q8TAP4 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LMO3Q8TAP4 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
LMO3Q8TAP4 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LMO3Q8TAP4 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LMO3Q8TAP4 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LMO3Q8TAP4 AC100803.2-201ENST00000562459 1963 ntBASIC19.5■□□□□ 0.71
LMO3Q8TAP4 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LMO3Q8TAP4 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
LMO3Q8TAP4 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LMO3Q8TAP4 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LMO3Q8TAP4 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
LMO3Q8TAP4 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.49■□□□□ 0.71
LMO3Q8TAP4 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LMO3Q8TAP4 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LMO3Q8TAP4 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LMO3Q8TAP4 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LMO3Q8TAP4 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.49■□□□□ 0.71
LMO3Q8TAP4 MIR662-201ENST00000384847 95 ntBASIC19.49■□□□□ 0.71
LMO3Q8TAP4 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.49■□□□□ 0.71
LMO3Q8TAP4 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
LMO3Q8TAP4 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.49■□□□□ 0.71
LMO3Q8TAP4 AL359075.1-203ENST00000462729 1002 ntBASIC19.49■□□□□ 0.71
LMO3Q8TAP4 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.49■□□□□ 0.71
LMO3Q8TAP4 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.49■□□□□ 0.71
LMO3Q8TAP4 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
LMO3Q8TAP4 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.49■□□□□ 0.71
LMO3Q8TAP4 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
LMO3Q8TAP4 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
LMO3Q8TAP4 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms