Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
CPSF7Q8N684 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CPSF7Q8N684 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CPSF7Q8N684 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CPSF7Q8N684 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CPSF7Q8N684 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CPSF7Q8N684 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.83■□□□□ 0.44
CPSF7Q8N684 MIR1224-201ENST00000408193 85 ntBASIC17.83■□□□□ 0.44
CPSF7Q8N684 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.83■□□□□ 0.44
CPSF7Q8N684 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.83■□□□□ 0.44
CPSF7Q8N684 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.83■□□□□ 0.44
CPSF7Q8N684 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.83■□□□□ 0.44
CPSF7Q8N684 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.83■□□□□ 0.44
CPSF7Q8N684 MIR6786-201ENST00000616843 113 ntBASIC17.83■□□□□ 0.44
CPSF7Q8N684 AL445675.2-201ENST00000620291 557 ntBASIC17.83■□□□□ 0.44
CPSF7Q8N684 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
CPSF7Q8N684 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.83■□□□□ 0.44
CPSF7Q8N684 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CPSF7Q8N684 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.83■□□□□ 0.44
CPSF7Q8N684 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.83■□□□□ 0.44
CPSF7Q8N684 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CPSF7Q8N684 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CPSF7Q8N684 AC006116.8-202ENST00000587620 1550 ntBASIC17.83■□□□□ 0.44
CPSF7Q8N684 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.82■□□□□ 0.44
CPSF7Q8N684 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CPSF7Q8N684 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CPSF7Q8N684 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CPSF7Q8N684 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CPSF7Q8N684 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CPSF7Q8N684 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CPSF7Q8N684 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CPSF7Q8N684 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CPSF7Q8N684 AC108860.2-201ENST00000562760 2183 ntBASIC17.82■□□□□ 0.44
CPSF7Q8N684 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.82■□□□□ 0.44
CPSF7Q8N684 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CPSF7Q8N684 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CPSF7Q8N684 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CPSF7Q8N684 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.82■□□□□ 0.44
CPSF7Q8N684 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.82■□□□□ 0.44
CPSF7Q8N684 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.82■□□□□ 0.44
CPSF7Q8N684 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.82■□□□□ 0.44
CPSF7Q8N684 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.82■□□□□ 0.44
CPSF7Q8N684 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.82■□□□□ 0.44
CPSF7Q8N684 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.82■□□□□ 0.44
CPSF7Q8N684 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CPSF7Q8N684 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CPSF7Q8N684 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CPSF7Q8N684 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CPSF7Q8N684 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CPSF7Q8N684 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CPSF7Q8N684 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CPSF7Q8N684 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CPSF7Q8N684 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
CPSF7Q8N684 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CPSF7Q8N684 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CPSF7Q8N684 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPSF7Q8N684 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPSF7Q8N684 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CPSF7Q8N684 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPSF7Q8N684 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.81■□□□□ 0.44
CPSF7Q8N684 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CPSF7Q8N684 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CPSF7Q8N684 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPSF7Q8N684 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CPSF7Q8N684 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPSF7Q8N684 RCN1P1-201ENST00000400413 996 ntBASIC17.81■□□□□ 0.44
CPSF7Q8N684 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.81■□□□□ 0.44
CPSF7Q8N684 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPSF7Q8N684 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.81■□□□□ 0.44
CPSF7Q8N684 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.81■□□□□ 0.44
CPSF7Q8N684 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.81■□□□□ 0.44
CPSF7Q8N684 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPSF7Q8N684 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPSF7Q8N684 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPSF7Q8N684 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPSF7Q8N684 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPSF7Q8N684 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPSF7Q8N684 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPSF7Q8N684 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CPSF7Q8N684 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CPSF7Q8N684 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CPSF7Q8N684 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CPSF7Q8N684 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.8■□□□□ 0.44
CPSF7Q8N684 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CPSF7Q8N684 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.8■□□□□ 0.44
CPSF7Q8N684 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.8■□□□□ 0.44
CPSF7Q8N684 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.8■□□□□ 0.44
CPSF7Q8N684 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CPSF7Q8N684 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.8■□□□□ 0.44
CPSF7Q8N684 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.8■□□□□ 0.44
CPSF7Q8N684 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CPSF7Q8N684 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.8■□□□□ 0.44
CPSF7Q8N684 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPSF7Q8N684 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPSF7Q8N684 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPSF7Q8N684 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPSF7Q8N684 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.8■□□□□ 0.44
CPSF7Q8N684 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.8■□□□□ 0.44
CPSF7Q8N684 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.79■□□□□ 0.44
CPSF7Q8N684 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms