Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rdh1Q8CGV4 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Rdh1Q8CGV4 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Rdh1Q8CGV4 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rdh1Q8CGV4 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rdh1Q8CGV4 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rdh1Q8CGV4 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rdh1Q8CGV4 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rdh1Q8CGV4 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.84□□□□□ -0.03
Rdh1Q8CGV4 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rdh1Q8CGV4 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rdh1Q8CGV4 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rdh1Q8CGV4 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.84□□□□□ -0.03
Rdh1Q8CGV4 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14.84□□□□□ -0.03
Rdh1Q8CGV4 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rdh1Q8CGV4 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Rdh1Q8CGV4 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rdh1Q8CGV4 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rdh1Q8CGV4 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.84□□□□□ -0.03
Rdh1Q8CGV4 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.84□□□□□ -0.03
Rdh1Q8CGV4 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rdh1Q8CGV4 Chchd1-203ENSMUST00000224633 557 ntBASIC14.84□□□□□ -0.03
Rdh1Q8CGV4 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rdh1Q8CGV4 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rdh1Q8CGV4 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rdh1Q8CGV4 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rdh1Q8CGV4 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rdh1Q8CGV4 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.84□□□□□ -0.03
Rdh1Q8CGV4 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rdh1Q8CGV4 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Rdh1Q8CGV4 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rdh1Q8CGV4 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rdh1Q8CGV4 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rdh1Q8CGV4 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rdh1Q8CGV4 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rdh1Q8CGV4 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.84□□□□□ -0.03
Rdh1Q8CGV4 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Rdh1Q8CGV4 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Rdh1Q8CGV4 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.83□□□□□ -0.03
Rdh1Q8CGV4 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rdh1Q8CGV4 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rdh1Q8CGV4 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rdh1Q8CGV4 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rdh1Q8CGV4 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rdh1Q8CGV4 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
Rdh1Q8CGV4 Gm16198-201ENSMUST00000118766 670 ntBASIC14.83□□□□□ -0.04
Rdh1Q8CGV4 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.83□□□□□ -0.04
Rdh1Q8CGV4 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.83□□□□□ -0.04
Rdh1Q8CGV4 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC14.83□□□□□ -0.04
Rdh1Q8CGV4 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rdh1Q8CGV4 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rdh1Q8CGV4 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Rdh1Q8CGV4 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rdh1Q8CGV4 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rdh1Q8CGV4 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rdh1Q8CGV4 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rdh1Q8CGV4 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rdh1Q8CGV4 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rdh1Q8CGV4 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rdh1Q8CGV4 AC069562.2-201ENSMUST00000224644 2146 ntBASIC14.83□□□□□ -0.04
Rdh1Q8CGV4 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Rdh1Q8CGV4 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rdh1Q8CGV4 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rdh1Q8CGV4 Prob1-201ENSMUST00000097619 3021 ntBASIC14.82□□□□□ -0.04
Rdh1Q8CGV4 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rdh1Q8CGV4 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rdh1Q8CGV4 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rdh1Q8CGV4 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rdh1Q8CGV4 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rdh1Q8CGV4 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rdh1Q8CGV4 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Rdh1Q8CGV4 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.82□□□□□ -0.04
Rdh1Q8CGV4 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14.82□□□□□ -0.04
Rdh1Q8CGV4 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Rdh1Q8CGV4 Gm27494-201ENSMUST00000184735 189 ntBASIC14.82□□□□□ -0.04
Rdh1Q8CGV4 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rdh1Q8CGV4 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rdh1Q8CGV4 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rdh1Q8CGV4 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Rdh1Q8CGV4 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rdh1Q8CGV4 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rdh1Q8CGV4 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rdh1Q8CGV4 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rdh1Q8CGV4 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rdh1Q8CGV4 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rdh1Q8CGV4 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rdh1Q8CGV4 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rdh1Q8CGV4 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rdh1Q8CGV4 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Rdh1Q8CGV4 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.81□□□□□ -0.04
Rdh1Q8CGV4 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rdh1Q8CGV4 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.81□□□□□ -0.04
Rdh1Q8CGV4 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rdh1Q8CGV4 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Rdh1Q8CGV4 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rdh1Q8CGV4 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rdh1Q8CGV4 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rdh1Q8CGV4 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rdh1Q8CGV4 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rdh1Q8CGV4 Gm9385-201ENSMUST00000117563 472 ntBASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms