Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
HSPG2P98160 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC11.22□□□□□ -0.61
HSPG2P98160 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
HSPG2P98160 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC11.22□□□□□ -0.61
HSPG2P98160 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC11.22□□□□□ -0.61
HSPG2P98160 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC11.22□□□□□ -0.61
HSPG2P98160 PWWP2AP1-201ENST00000429776 2273 ntBASIC11.22□□□□□ -0.61
HSPG2P98160 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
HSPG2P98160 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
HSPG2P98160 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
HSPG2P98160 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
HSPG2P98160 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC11.22□□□□□ -0.61
HSPG2P98160 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC11.22□□□□□ -0.61
HSPG2P98160 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
HSPG2P98160 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
HSPG2P98160 ARTN-206ENST00000472435 402 ntTSL 3 BASIC11.21□□□□□ -0.61
HSPG2P98160 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC11.21□□□□□ -0.61
HSPG2P98160 RIN3-211ENST00000557762 517 ntTSL 3 BASIC11.21□□□□□ -0.61
HSPG2P98160 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
HSPG2P98160 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
HSPG2P98160 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
HSPG2P98160 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
HSPG2P98160 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
HSPG2P98160 HNRNPFP1-201ENST00000391730 1133 ntBASIC11.21□□□□□ -0.61
HSPG2P98160 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC11.21□□□□□ -0.61
HSPG2P98160 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC11.21□□□□□ -0.61
HSPG2P98160 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC11.21□□□□□ -0.61
HSPG2P98160 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC11.21□□□□□ -0.61
HSPG2P98160 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.61
HSPG2P98160 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC11.21□□□□□ -0.61
HSPG2P98160 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
HSPG2P98160 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC11.21□□□□□ -0.61
HSPG2P98160 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
HSPG2P98160 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
HSPG2P98160 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC11.21□□□□□ -0.62
HSPG2P98160 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC11.21□□□□□ -0.62
HSPG2P98160 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
HSPG2P98160 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.62
HSPG2P98160 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
HSPG2P98160 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
HSPG2P98160 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
HSPG2P98160 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
HSPG2P98160 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC11.21□□□□□ -0.62
HSPG2P98160 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
HSPG2P98160 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC11.21□□□□□ -0.62
HSPG2P98160 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
HSPG2P98160 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
HSPG2P98160 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC11.21□□□□□ -0.62
HSPG2P98160 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC11.21□□□□□ -0.62
HSPG2P98160 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
HSPG2P98160 TERF1P3-201ENST00000505638 1227 ntBASIC11.21□□□□□ -0.62
HSPG2P98160 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.62
HSPG2P98160 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC11.21□□□□□ -0.62
HSPG2P98160 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC11.21□□□□□ -0.62
HSPG2P98160 CIPC-205ENST00000555437 566 ntTSL 3 BASIC11.21□□□□□ -0.62
HSPG2P98160 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC11.21□□□□□ -0.62
HSPG2P98160 AC004835.2-201ENST00000603762 682 ntBASIC11.21□□□□□ -0.62
HSPG2P98160 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC11.2□□□□□ -0.62
HSPG2P98160 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
HSPG2P98160 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC11.2□□□□□ -0.62
HSPG2P98160 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
HSPG2P98160 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC11.2□□□□□ -0.62
HSPG2P98160 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
HSPG2P98160 PRYP5-201ENST00000451909 266 ntBASIC11.2□□□□□ -0.62
HSPG2P98160 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
HSPG2P98160 ADK-206ENST00000541550 2222 ntTSL 2 BASIC11.2□□□□□ -0.62
HSPG2P98160 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
HSPG2P98160 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
HSPG2P98160 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
HSPG2P98160 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
HSPG2P98160 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
HSPG2P98160 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
HSPG2P98160 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC11.2□□□□□ -0.62
HSPG2P98160 AC007375.3-201ENST00000600936 2314 ntBASIC11.2□□□□□ -0.62
HSPG2P98160 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
HSPG2P98160 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
HSPG2P98160 FAM58DP-201ENST00000428076 619 ntBASIC11.2□□□□□ -0.62
HSPG2P98160 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC11.2□□□□□ -0.62
HSPG2P98160 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
HSPG2P98160 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
HSPG2P98160 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
HSPG2P98160 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC11.2□□□□□ -0.62
HSPG2P98160 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
HSPG2P98160 AC148477.5-201ENST00000625164 1645 ntBASIC11.2□□□□□ -0.62
HSPG2P98160 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
HSPG2P98160 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
HSPG2P98160 AC012676.1-201ENST00000574705 1949 ntBASIC11.2□□□□□ -0.62
HSPG2P98160 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
HSPG2P98160 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC11.2□□□□□ -0.62
HSPG2P98160 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC11.2□□□□□ -0.62
HSPG2P98160 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
HSPG2P98160 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC11.2□□□□□ -0.62
HSPG2P98160 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC11.2□□□□□ -0.62
HSPG2P98160 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC11.2□□□□□ -0.62
HSPG2P98160 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
HSPG2P98160 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
HSPG2P98160 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC11.19□□□□□ -0.62
HSPG2P98160 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC11.19□□□□□ -0.62
HSPG2P98160 NEK7-201ENST00000367383 586 ntTSL 2 BASIC11.19□□□□□ -0.62
HSPG2P98160 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC11.19□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms