Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cacna1aP97445 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cacna1aP97445 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cacna1aP97445 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Cacna1aP97445 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Cacna1aP97445 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.12□□□□□ -0.15
Cacna1aP97445 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cacna1aP97445 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cacna1aP97445 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.12□□□□□ -0.15
Cacna1aP97445 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cacna1aP97445 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cacna1aP97445 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Cacna1aP97445 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.11□□□□□ -0.15
Cacna1aP97445 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cacna1aP97445 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Cacna1aP97445 Gm27618-201ENSMUST00000183671 60 ntBASIC14.11□□□□□ -0.15
Cacna1aP97445 Gm2272-201ENSMUST00000194903 582 ntBASIC14.11□□□□□ -0.15
Cacna1aP97445 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.11□□□□□ -0.15
Cacna1aP97445 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.11□□□□□ -0.15
Cacna1aP97445 Gm10154-201ENSMUST00000084445 354 ntBASIC14.11□□□□□ -0.15
Cacna1aP97445 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cacna1aP97445 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cacna1aP97445 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cacna1aP97445 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cacna1aP97445 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cacna1aP97445 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cacna1aP97445 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC14.11□□□□□ -0.15
Cacna1aP97445 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC14.11□□□□□ -0.15
Cacna1aP97445 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Cacna1aP97445 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cacna1aP97445 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC14.11□□□□□ -0.15
Cacna1aP97445 Gm17837-201ENSMUST00000186435 985 ntBASIC14.11□□□□□ -0.15
Cacna1aP97445 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cacna1aP97445 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Cacna1aP97445 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cacna1aP97445 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cacna1aP97445 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Cacna1aP97445 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cacna1aP97445 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cacna1aP97445 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cacna1aP97445 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cacna1aP97445 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cacna1aP97445 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Cacna1aP97445 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cacna1aP97445 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Cacna1aP97445 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC14.1□□□□□ -0.15
Cacna1aP97445 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.1□□□□□ -0.15
Cacna1aP97445 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.1□□□□□ -0.15
Cacna1aP97445 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cacna1aP97445 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cacna1aP97445 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cacna1aP97445 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cacna1aP97445 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cacna1aP97445 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cacna1aP97445 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.1□□□□□ -0.15
Cacna1aP97445 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Cacna1aP97445 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cacna1aP97445 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cacna1aP97445 Gm44832-201ENSMUST00000208849 2303 ntBASIC14.1□□□□□ -0.15
Cacna1aP97445 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Cacna1aP97445 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cacna1aP97445 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cacna1aP97445 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Cacna1aP97445 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cacna1aP97445 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cacna1aP97445 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cacna1aP97445 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cacna1aP97445 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cacna1aP97445 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cacna1aP97445 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Cacna1aP97445 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cacna1aP97445 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cacna1aP97445 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cacna1aP97445 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cacna1aP97445 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC14.1□□□□□ -0.15
Cacna1aP97445 Gm27680-201ENSMUST00000184192 160 ntBASIC14.1□□□□□ -0.15
Cacna1aP97445 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.1□□□□□ -0.15
Cacna1aP97445 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.1□□□□□ -0.15
Cacna1aP97445 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.1□□□□□ -0.15
Cacna1aP97445 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC14.1□□□□□ -0.15
Cacna1aP97445 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC14.1□□□□□ -0.15
Cacna1aP97445 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14.1□□□□□ -0.15
Cacna1aP97445 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Cacna1aP97445 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cacna1aP97445 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Cacna1aP97445 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cacna1aP97445 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cacna1aP97445 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cacna1aP97445 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.09□□□□□ -0.15
Cacna1aP97445 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Cacna1aP97445 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cacna1aP97445 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
Cacna1aP97445 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cacna1aP97445 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.09□□□□□ -0.15
Cacna1aP97445 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.09□□□□□ -0.15
Cacna1aP97445 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cacna1aP97445 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC14.09□□□□□ -0.15
Cacna1aP97445 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cacna1aP97445 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.09□□□□□ -0.15
Cacna1aP97445 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms