Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC19.16■□□□□ 0.66
Nkx2-3P97334 Gm6888-201ENSMUST00000221983 706 ntBASIC19.16■□□□□ 0.66
Nkx2-3P97334 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nkx2-3P97334 Gm2423-201ENSMUST00000074863 733 ntBASIC19.16■□□□□ 0.66
Nkx2-3P97334 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nkx2-3P97334 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nkx2-3P97334 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nkx2-3P97334 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nkx2-3P97334 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nkx2-3P97334 Tcf21-202ENSMUST00000218002 1788 ntBASIC19.16■□□□□ 0.66
Nkx2-3P97334 Ccdc166-201ENSMUST00000182172 2584 ntBASIC19.16■□□□□ 0.66
Nkx2-3P97334 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Nkx2-3P97334 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nkx2-3P97334 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Nkx2-3P97334 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nkx2-3P97334 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC19.15■□□□□ 0.66
Nkx2-3P97334 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Nkx2-3P97334 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nkx2-3P97334 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nkx2-3P97334 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC19.15■□□□□ 0.66
Nkx2-3P97334 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nkx2-3P97334 Celf4-206ENSMUST00000224553 1729 ntBASIC19.15■□□□□ 0.66
Nkx2-3P97334 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC19.15■□□□□ 0.66
Nkx2-3P97334 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nkx2-3P97334 Gm11543-201ENSMUST00000120758 370 ntBASIC19.15■□□□□ 0.66
Nkx2-3P97334 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC19.15■□□□□ 0.66
Nkx2-3P97334 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Nkx2-3P97334 Gm17837-201ENSMUST00000186435 985 ntBASIC19.15■□□□□ 0.66
Nkx2-3P97334 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC19.15■□□□□ 0.66
Nkx2-3P97334 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Nkx2-3P97334 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Nkx2-3P97334 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nkx2-3P97334 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nkx2-3P97334 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nkx2-3P97334 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC19.15■□□□□ 0.66
Nkx2-3P97334 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC19.15■□□□□ 0.66
Nkx2-3P97334 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nkx2-3P97334 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC19.15■□□□□ 0.66
Nkx2-3P97334 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nkx2-3P97334 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC19.15■□□□□ 0.66
Nkx2-3P97334 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nkx2-3P97334 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Nkx2-3P97334 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.14■□□□□ 0.66
Nkx2-3P97334 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Nkx2-3P97334 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
Nkx2-3P97334 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC19.14■□□□□ 0.65
Nkx2-3P97334 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nkx2-3P97334 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nkx2-3P97334 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nkx2-3P97334 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nkx2-3P97334 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nkx2-3P97334 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC19.14■□□□□ 0.65
Nkx2-3P97334 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Nkx2-3P97334 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nkx2-3P97334 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC19.14■□□□□ 0.65
Nkx2-3P97334 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nkx2-3P97334 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nkx2-3P97334 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Nkx2-3P97334 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC19.14■□□□□ 0.65
Nkx2-3P97334 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nkx2-3P97334 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nkx2-3P97334 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nkx2-3P97334 Gm8242-201ENSMUST00000193029 1420 ntBASIC19.14■□□□□ 0.65
Nkx2-3P97334 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Nkx2-3P97334 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nkx2-3P97334 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Nkx2-3P97334 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nkx2-3P97334 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC19.14■□□□□ 0.65
Nkx2-3P97334 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nkx2-3P97334 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nkx2-3P97334 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nkx2-3P97334 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC19.13■□□□□ 0.65
Nkx2-3P97334 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC19.13■□□□□ 0.65
Nkx2-3P97334 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nkx2-3P97334 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nkx2-3P97334 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Nkx2-3P97334 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nkx2-3P97334 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
Nkx2-3P97334 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC19.13■□□□□ 0.65
Nkx2-3P97334 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nkx2-3P97334 Gm9824-201ENSMUST00000178707 561 ntBASIC19.13■□□□□ 0.65
Nkx2-3P97334 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nkx2-3P97334 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nkx2-3P97334 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nkx2-3P97334 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Nkx2-3P97334 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nkx2-3P97334 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nkx2-3P97334 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nkx2-3P97334 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
Nkx2-3P97334 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nkx2-3P97334 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nkx2-3P97334 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nkx2-3P97334 AC163637.1-201ENSMUST00000215491 1894 ntBASIC19.12■□□□□ 0.65
Nkx2-3P97334 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC19.12■□□□□ 0.65
Nkx2-3P97334 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nkx2-3P97334 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Nkx2-3P97334 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Nkx2-3P97334 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Nkx2-3P97334 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Nkx2-3P97334 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms