Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.05■□□□□ 0.32
OPN1SWP03999 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
OPN1SWP03999 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
OPN1SWP03999 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
OPN1SWP03999 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
OPN1SWP03999 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
OPN1SWP03999 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.05■□□□□ 0.32
OPN1SWP03999 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
OPN1SWP03999 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
OPN1SWP03999 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
OPN1SWP03999 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
OPN1SWP03999 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.05■□□□□ 0.32
OPN1SWP03999 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
OPN1SWP03999 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.04■□□□□ 0.32
OPN1SWP03999 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
OPN1SWP03999 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
OPN1SWP03999 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
OPN1SWP03999 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
OPN1SWP03999 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
OPN1SWP03999 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
OPN1SWP03999 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.04■□□□□ 0.32
OPN1SWP03999 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
OPN1SWP03999 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
OPN1SWP03999 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
OPN1SWP03999 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
OPN1SWP03999 PRORSD1P-201ENST00000295112 541 ntBASIC17.04■□□□□ 0.32
OPN1SWP03999 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
OPN1SWP03999 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.04■□□□□ 0.32
OPN1SWP03999 AC142381.4-202ENST00000563973 229 ntBASIC17.04■□□□□ 0.32
OPN1SWP03999 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.04■□□□□ 0.32
OPN1SWP03999 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.04■□□□□ 0.32
OPN1SWP03999 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.04■□□□□ 0.32
OPN1SWP03999 AC113410.3-201ENST00000623366 203 ntBASIC17.04■□□□□ 0.32
OPN1SWP03999 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
OPN1SWP03999 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
OPN1SWP03999 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
OPN1SWP03999 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
OPN1SWP03999 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
OPN1SWP03999 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
OPN1SWP03999 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
OPN1SWP03999 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
OPN1SWP03999 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
OPN1SWP03999 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
OPN1SWP03999 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
OPN1SWP03999 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
OPN1SWP03999 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
OPN1SWP03999 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
OPN1SWP03999 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
OPN1SWP03999 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
OPN1SWP03999 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
OPN1SWP03999 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.03■□□□□ 0.32
OPN1SWP03999 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.03■□□□□ 0.32
OPN1SWP03999 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.03■□□□□ 0.32
OPN1SWP03999 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
OPN1SWP03999 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.03■□□□□ 0.32
OPN1SWP03999 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
OPN1SWP03999 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
OPN1SWP03999 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
OPN1SWP03999 AC139713.2-201ENST00000641328 2723 ntBASIC17.03■□□□□ 0.32
OPN1SWP03999 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
OPN1SWP03999 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.03■□□□□ 0.32
OPN1SWP03999 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
OPN1SWP03999 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
OPN1SWP03999 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
OPN1SWP03999 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
OPN1SWP03999 AC098590.1-201ENST00000468126 897 ntBASIC17.03■□□□□ 0.32
OPN1SWP03999 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.03■□□□□ 0.32
OPN1SWP03999 REXO1L10P-201ENST00000615707 1290 ntBASIC17.03■□□□□ 0.32
OPN1SWP03999 REXO1L12P-201ENST00000622156 912 ntBASIC17.03■□□□□ 0.32
OPN1SWP03999 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
OPN1SWP03999 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
OPN1SWP03999 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
OPN1SWP03999 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
OPN1SWP03999 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
OPN1SWP03999 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.03■□□□□ 0.32
OPN1SWP03999 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
OPN1SWP03999 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
OPN1SWP03999 AC009102.3-201ENST00000623118 1491 ntBASIC17.03■□□□□ 0.32
OPN1SWP03999 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
OPN1SWP03999 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
OPN1SWP03999 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
OPN1SWP03999 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
OPN1SWP03999 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.03■□□□□ 0.32
OPN1SWP03999 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
OPN1SWP03999 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
OPN1SWP03999 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.03■□□□□ 0.32
OPN1SWP03999 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
OPN1SWP03999 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
OPN1SWP03999 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.03■□□□□ 0.32
OPN1SWP03999 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
OPN1SWP03999 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.03■□□□□ 0.32
OPN1SWP03999 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
OPN1SWP03999 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
OPN1SWP03999 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
OPN1SWP03999 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
OPN1SWP03999 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
OPN1SWP03999 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.02■□□□□ 0.32
OPN1SWP03999 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
OPN1SWP03999 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
OPN1SWP03999 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms