Protein–RNA interactions for Protein: O88456

Capns1, Calpain small subunit 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capns1O88456 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC14.21□□□□□ -0.13
Capns1O88456 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Capns1O88456 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Capns1O88456 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Capns1O88456 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Capns1O88456 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.21□□□□□ -0.14
Capns1O88456 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
Capns1O88456 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Capns1O88456 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.14
Capns1O88456 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Capns1O88456 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Capns1O88456 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Capns1O88456 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Capns1O88456 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Capns1O88456 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Capns1O88456 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Capns1O88456 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Capns1O88456 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Capns1O88456 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Capns1O88456 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Capns1O88456 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Capns1O88456 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Capns1O88456 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14.2□□□□□ -0.14
Capns1O88456 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Capns1O88456 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Capns1O88456 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14.2□□□□□ -0.14
Capns1O88456 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Capns1O88456 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Capns1O88456 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Capns1O88456 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Capns1O88456 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Capns1O88456 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Capns1O88456 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Capns1O88456 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Capns1O88456 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Capns1O88456 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Capns1O88456 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Capns1O88456 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Capns1O88456 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Capns1O88456 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Capns1O88456 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Capns1O88456 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Capns1O88456 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Capns1O88456 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Capns1O88456 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Capns1O88456 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Capns1O88456 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Capns1O88456 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.19□□□□□ -0.14
Capns1O88456 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Capns1O88456 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Capns1O88456 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Capns1O88456 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Capns1O88456 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC14.19□□□□□ -0.14
Capns1O88456 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Capns1O88456 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Capns1O88456 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Capns1O88456 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Capns1O88456 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Capns1O88456 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Capns1O88456 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Capns1O88456 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Capns1O88456 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Capns1O88456 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Capns1O88456 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Capns1O88456 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Capns1O88456 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Capns1O88456 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Capns1O88456 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Capns1O88456 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Capns1O88456 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Capns1O88456 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Capns1O88456 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Capns1O88456 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Capns1O88456 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Capns1O88456 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Capns1O88456 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Capns1O88456 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Capns1O88456 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC14.18□□□□□ -0.14
Capns1O88456 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Capns1O88456 Gm26039-201ENSMUST00000158152 144 ntBASIC14.18□□□□□ -0.14
Capns1O88456 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Capns1O88456 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC14.18□□□□□ -0.14
Capns1O88456 Gm28659-201ENSMUST00000188013 759 ntBASIC14.18□□□□□ -0.14
Capns1O88456 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Capns1O88456 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Capns1O88456 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Capns1O88456 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Capns1O88456 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Capns1O88456 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Capns1O88456 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Capns1O88456 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Capns1O88456 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Capns1O88456 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Capns1O88456 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Capns1O88456 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Capns1O88456 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.18□□□□□ -0.14
Capns1O88456 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Capns1O88456 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Capns1O88456 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Capns1O88456 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms