Protein–RNA interactions for Protein: F6SW83

Gm10477, Predicted gene 10477, mousemouse

Predictions only

Length 55 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10477F6SW83 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm10477F6SW83 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm10477F6SW83 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm10477F6SW83 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Gm10477F6SW83 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm10477F6SW83 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Gm10477F6SW83 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm10477F6SW83 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm10477F6SW83 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Gm10477F6SW83 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm10477F6SW83 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm10477F6SW83 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Gm10477F6SW83 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm10477F6SW83 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm10477F6SW83 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm10477F6SW83 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm10477F6SW83 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Gm10477F6SW83 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm10477F6SW83 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm10477F6SW83 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm10477F6SW83 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Gm10477F6SW83 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.23□□□□□ -0.13
Gm10477F6SW83 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm10477F6SW83 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Gm10477F6SW83 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm10477F6SW83 Gm10849-201ENSMUST00000100397 618 ntBASIC14.23□□□□□ -0.13
Gm10477F6SW83 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC14.23□□□□□ -0.13
Gm10477F6SW83 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Gm10477F6SW83 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC14.23□□□□□ -0.13
Gm10477F6SW83 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC14.23□□□□□ -0.13
Gm10477F6SW83 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC14.23□□□□□ -0.13
Gm10477F6SW83 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm10477F6SW83 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.23□□□□□ -0.13
Gm10477F6SW83 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Gm10477F6SW83 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm10477F6SW83 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm10477F6SW83 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm10477F6SW83 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Gm10477F6SW83 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Gm10477F6SW83 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Gm10477F6SW83 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Gm10477F6SW83 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm10477F6SW83 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Gm10477F6SW83 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm10477F6SW83 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm10477F6SW83 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm10477F6SW83 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm10477F6SW83 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm10477F6SW83 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm10477F6SW83 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm10477F6SW83 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm10477F6SW83 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm10477F6SW83 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm10477F6SW83 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm10477F6SW83 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm10477F6SW83 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm10477F6SW83 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm10477F6SW83 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Gm10477F6SW83 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm10477F6SW83 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm10477F6SW83 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Gm10477F6SW83 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Gm10477F6SW83 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm10477F6SW83 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm10477F6SW83 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Gm10477F6SW83 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Gm10477F6SW83 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm10477F6SW83 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm10477F6SW83 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Gm10477F6SW83 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm10477F6SW83 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.21□□□□□ -0.13
Gm10477F6SW83 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm10477F6SW83 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm10477F6SW83 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm10477F6SW83 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.21□□□□□ -0.13
Gm10477F6SW83 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm10477F6SW83 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Gm10477F6SW83 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.21□□□□□ -0.13
Gm10477F6SW83 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.21□□□□□ -0.13
Gm10477F6SW83 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm10477F6SW83 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm10477F6SW83 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Gm10477F6SW83 Gm13181-201ENSMUST00000120117 1069 ntBASIC14.21□□□□□ -0.13
Gm10477F6SW83 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm10477F6SW83 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm10477F6SW83 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm10477F6SW83 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Gm10477F6SW83 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm10477F6SW83 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm10477F6SW83 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Gm10477F6SW83 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm10477F6SW83 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.14
Gm10477F6SW83 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Gm10477F6SW83 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Gm10477F6SW83 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Gm10477F6SW83 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Gm10477F6SW83 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Gm10477F6SW83 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm10477F6SW83 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gm10477F6SW83 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms