Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRDV1A0A1B0GX56 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRDV1A0A1B0GX56 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRDV1A0A1B0GX56 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRDV1A0A1B0GX56 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.04■□□□□ 0.16
TRDV1A0A1B0GX56 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.04■□□□□ 0.16
TRDV1A0A1B0GX56 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
TRDV1A0A1B0GX56 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRDV1A0A1B0GX56 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRDV1A0A1B0GX56 KRT8P50-201ENST00000562022 1438 ntBASIC16.04■□□□□ 0.16
TRDV1A0A1B0GX56 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRDV1A0A1B0GX56 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRDV1A0A1B0GX56 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.04■□□□□ 0.16
TRDV1A0A1B0GX56 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.04■□□□□ 0.16
TRDV1A0A1B0GX56 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRDV1A0A1B0GX56 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.04■□□□□ 0.16
TRDV1A0A1B0GX56 MIR663A-201ENST00000385250 93 ntBASIC16.04■□□□□ 0.16
TRDV1A0A1B0GX56 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.04■□□□□ 0.16
TRDV1A0A1B0GX56 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRDV1A0A1B0GX56 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
TRDV1A0A1B0GX56 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC16.04■□□□□ 0.16
TRDV1A0A1B0GX56 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRDV1A0A1B0GX56 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC16.04■□□□□ 0.16
TRDV1A0A1B0GX56 AC080038.1-201ENST00000611274 1154 ntBASIC16.04■□□□□ 0.16
TRDV1A0A1B0GX56 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRDV1A0A1B0GX56 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.04■□□□□ 0.16
TRDV1A0A1B0GX56 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRDV1A0A1B0GX56 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRDV1A0A1B0GX56 AC133963.1-201ENST00000504166 1679 ntBASIC16.04■□□□□ 0.16
TRDV1A0A1B0GX56 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TRDV1A0A1B0GX56 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
TRDV1A0A1B0GX56 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.04■□□□□ 0.16
TRDV1A0A1B0GX56 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TRDV1A0A1B0GX56 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
TRDV1A0A1B0GX56 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
TRDV1A0A1B0GX56 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRDV1A0A1B0GX56 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRDV1A0A1B0GX56 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRDV1A0A1B0GX56 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.04■□□□□ 0.16
TRDV1A0A1B0GX56 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRDV1A0A1B0GX56 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRDV1A0A1B0GX56 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
TRDV1A0A1B0GX56 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRDV1A0A1B0GX56 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.03■□□□□ 0.16
TRDV1A0A1B0GX56 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRDV1A0A1B0GX56 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRDV1A0A1B0GX56 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRDV1A0A1B0GX56 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.03■□□□□ 0.16
TRDV1A0A1B0GX56 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
TRDV1A0A1B0GX56 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRDV1A0A1B0GX56 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRDV1A0A1B0GX56 PPP1R14BP2-201ENST00000426284 444 ntBASIC16.03■□□□□ 0.16
TRDV1A0A1B0GX56 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRDV1A0A1B0GX56 THEM4-205ENST00000489410 643 ntTSL 2 BASIC16.03■□□□□ 0.16
TRDV1A0A1B0GX56 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRDV1A0A1B0GX56 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC16.03■□□□□ 0.16
TRDV1A0A1B0GX56 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
TRDV1A0A1B0GX56 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRDV1A0A1B0GX56 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.03■□□□□ 0.16
TRDV1A0A1B0GX56 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRDV1A0A1B0GX56 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.03■□□□□ 0.16
TRDV1A0A1B0GX56 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRDV1A0A1B0GX56 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRDV1A0A1B0GX56 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRDV1A0A1B0GX56 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRDV1A0A1B0GX56 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.03■□□□□ 0.16
TRDV1A0A1B0GX56 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRDV1A0A1B0GX56 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.03■□□□□ 0.16
TRDV1A0A1B0GX56 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRDV1A0A1B0GX56 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRDV1A0A1B0GX56 CROCCP2-202ENST00000412962 2773 ntBASIC16.03■□□□□ 0.16
TRDV1A0A1B0GX56 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRDV1A0A1B0GX56 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRDV1A0A1B0GX56 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRDV1A0A1B0GX56 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRDV1A0A1B0GX56 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC16.02■□□□□ 0.16
TRDV1A0A1B0GX56 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.02■□□□□ 0.16
TRDV1A0A1B0GX56 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRDV1A0A1B0GX56 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRDV1A0A1B0GX56 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.02■□□□□ 0.16
TRDV1A0A1B0GX56 PKD1P1-201ENST00000458669 6805 ntBASIC16.02■□□□□ 0.16
TRDV1A0A1B0GX56 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.02■□□□□ 0.16
TRDV1A0A1B0GX56 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
TRDV1A0A1B0GX56 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRDV1A0A1B0GX56 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRDV1A0A1B0GX56 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRDV1A0A1B0GX56 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
TRDV1A0A1B0GX56 UNC93B4-201ENST00000505679 747 ntBASIC16.02■□□□□ 0.16
TRDV1A0A1B0GX56 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.02■□□□□ 0.16
TRDV1A0A1B0GX56 TK2-208ENST00000545043 1120 ntTSL 2 BASIC16.02■□□□□ 0.16
TRDV1A0A1B0GX56 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRDV1A0A1B0GX56 AL445675.2-201ENST00000620291 557 ntBASIC16.02■□□□□ 0.16
TRDV1A0A1B0GX56 AC131212.4-201ENST00000623606 975 ntBASIC16.02■□□□□ 0.16
TRDV1A0A1B0GX56 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRDV1A0A1B0GX56 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
TRDV1A0A1B0GX56 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRDV1A0A1B0GX56 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRDV1A0A1B0GX56 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRDV1A0A1B0GX56 SDHAP2-201ENST00000455183 2001 ntBASIC16.02■□□□□ 0.15
TRDV1A0A1B0GX56 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms