Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cfap99A0A140LIX9 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC18.3■□□□□ 0.52
Cfap99A0A140LIX9 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cfap99A0A140LIX9 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cfap99A0A140LIX9 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC18.3■□□□□ 0.52
Cfap99A0A140LIX9 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Cfap99A0A140LIX9 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cfap99A0A140LIX9 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC18.3■□□□□ 0.52
Cfap99A0A140LIX9 Gm44443-201ENSMUST00000204396 5633 ntBASIC18.3■□□□□ 0.52
Cfap99A0A140LIX9 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cfap99A0A140LIX9 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cfap99A0A140LIX9 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Cfap99A0A140LIX9 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cfap99A0A140LIX9 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cfap99A0A140LIX9 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cfap99A0A140LIX9 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC18.3■□□□□ 0.52
Cfap99A0A140LIX9 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cfap99A0A140LIX9 Gm27300-201ENSMUST00000184085 97 ntBASIC18.3■□□□□ 0.52
Cfap99A0A140LIX9 Gm27335-201ENSMUST00000184758 97 ntBASIC18.3■□□□□ 0.52
Cfap99A0A140LIX9 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cfap99A0A140LIX9 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cfap99A0A140LIX9 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cfap99A0A140LIX9 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cfap99A0A140LIX9 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cfap99A0A140LIX9 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Cfap99A0A140LIX9 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cfap99A0A140LIX9 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cfap99A0A140LIX9 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cfap99A0A140LIX9 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cfap99A0A140LIX9 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cfap99A0A140LIX9 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cfap99A0A140LIX9 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cfap99A0A140LIX9 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cfap99A0A140LIX9 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cfap99A0A140LIX9 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Cfap99A0A140LIX9 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cfap99A0A140LIX9 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cfap99A0A140LIX9 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cfap99A0A140LIX9 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cfap99A0A140LIX9 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC18.29■□□□□ 0.52
Cfap99A0A140LIX9 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC18.29■□□□□ 0.52
Cfap99A0A140LIX9 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC18.29■□□□□ 0.52
Cfap99A0A140LIX9 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC18.29■□□□□ 0.52
Cfap99A0A140LIX9 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cfap99A0A140LIX9 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cfap99A0A140LIX9 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC18.29■□□□□ 0.52
Cfap99A0A140LIX9 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cfap99A0A140LIX9 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Cfap99A0A140LIX9 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cfap99A0A140LIX9 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cfap99A0A140LIX9 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cfap99A0A140LIX9 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
Cfap99A0A140LIX9 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cfap99A0A140LIX9 AC163637.1-201ENSMUST00000215491 1894 ntBASIC18.29■□□□□ 0.52
Cfap99A0A140LIX9 Wnt10b-206ENSMUST00000228546 2709 ntBASIC18.29■□□□□ 0.52
Cfap99A0A140LIX9 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cfap99A0A140LIX9 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Cfap99A0A140LIX9 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cfap99A0A140LIX9 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cfap99A0A140LIX9 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cfap99A0A140LIX9 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cfap99A0A140LIX9 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
Cfap99A0A140LIX9 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC18.28■□□□□ 0.52
Cfap99A0A140LIX9 Gm4899-201ENSMUST00000178708 719 ntBASIC18.28■□□□□ 0.52
Cfap99A0A140LIX9 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cfap99A0A140LIX9 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cfap99A0A140LIX9 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cfap99A0A140LIX9 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cfap99A0A140LIX9 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cfap99A0A140LIX9 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC18.27■□□□□ 0.52
Cfap99A0A140LIX9 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cfap99A0A140LIX9 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cfap99A0A140LIX9 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cfap99A0A140LIX9 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cfap99A0A140LIX9 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cfap99A0A140LIX9 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cfap99A0A140LIX9 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cfap99A0A140LIX9 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cfap99A0A140LIX9 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cfap99A0A140LIX9 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cfap99A0A140LIX9 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cfap99A0A140LIX9 Gm14701-201ENSMUST00000117156 348 ntBASIC18.27■□□□□ 0.52
Cfap99A0A140LIX9 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cfap99A0A140LIX9 Gm6257-201ENSMUST00000163864 910 ntBASIC18.27■□□□□ 0.52
Cfap99A0A140LIX9 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Cfap99A0A140LIX9 Gm7787-201ENSMUST00000216858 688 ntBASIC18.27■□□□□ 0.52
Cfap99A0A140LIX9 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cfap99A0A140LIX9 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Cfap99A0A140LIX9 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cfap99A0A140LIX9 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cfap99A0A140LIX9 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cfap99A0A140LIX9 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cfap99A0A140LIX9 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cfap99A0A140LIX9 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Cfap99A0A140LIX9 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Cfap99A0A140LIX9 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Cfap99A0A140LIX9 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cfap99A0A140LIX9 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Cfap99A0A140LIX9 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cfap99A0A140LIX9 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms