Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Gm32996-201ENSMUST00000199828 1447 ntBASIC11.63□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Gm43353-201ENSMUST00000199224 1295 ntBASIC11.63□□□□□ -0.55
Trav3n-3A0A0G2JEM0 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC11.63□□□□□ -0.55
Trav3n-3A0A0G2JEM0 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3n-3A0A0G2JEM0 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC11.63□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC11.63□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC11.63□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC11.62□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC11.62□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Gm37297-201ENSMUST00000192974 2384 ntBASIC11.62□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC11.62□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Gm16061-201ENSMUST00000122167 857 ntBASIC11.62□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC11.62□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Gm10653-202ENSMUST00000139570 835 ntBASIC11.62□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC11.62□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Gm36967-201ENSMUST00000193814 266 ntBASIC11.62□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Gm29707-201ENSMUST00000196325 491 ntBASIC11.62□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Gm44450-201ENSMUST00000199528 114 ntBASIC11.62□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC11.62□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC11.62□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3n-3A0A0G2JEM0 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC11.61□□□□□ -0.55
Trav3n-3A0A0G2JEM0 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3n-3A0A0G2JEM0 CT025689.6-201ENSMUST00000224991 1104 ntBASIC11.61□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms