Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Gm38318-201ENSMUST00000195769 1706 ntBASIC12.32□□□□□ -0.44
Trav6-1A0A075B5Z8 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-1A0A075B5Z8 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-1A0A075B5Z8 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12.32□□□□□ -0.44
Trav6-1A0A075B5Z8 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-1A0A075B5Z8 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
Trav6-1A0A075B5Z8 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC12.32□□□□□ -0.44
Trav6-1A0A075B5Z8 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC12.32□□□□□ -0.44
Trav6-1A0A075B5Z8 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC12.32□□□□□ -0.44
Trav6-1A0A075B5Z8 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-1A0A075B5Z8 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-1A0A075B5Z8 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC12.32□□□□□ -0.44
Trav6-1A0A075B5Z8 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-1A0A075B5Z8 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-1A0A075B5Z8 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Trav6-1A0A075B5Z8 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-1A0A075B5Z8 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-1A0A075B5Z8 Gm14780-201ENSMUST00000118387 2737 ntBASIC12.32□□□□□ -0.44
Trav6-1A0A075B5Z8 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-1A0A075B5Z8 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-1A0A075B5Z8 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-1A0A075B5Z8 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-1A0A075B5Z8 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-1A0A075B5Z8 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC12.32□□□□□ -0.44
Trav6-1A0A075B5Z8 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-1A0A075B5Z8 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-1A0A075B5Z8 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-1A0A075B5Z8 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trav6-1A0A075B5Z8 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trav6-1A0A075B5Z8 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trav6-1A0A075B5Z8 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.31□□□□□ -0.44
Trav6-1A0A075B5Z8 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-1A0A075B5Z8 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trav6-1A0A075B5Z8 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-1A0A075B5Z8 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-1A0A075B5Z8 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Trav6-1A0A075B5Z8 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-1A0A075B5Z8 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-1A0A075B5Z8 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-1A0A075B5Z8 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.31□□□□□ -0.44
Trav6-1A0A075B5Z8 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trav6-1A0A075B5Z8 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-1A0A075B5Z8 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-1A0A075B5Z8 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC12.31□□□□□ -0.44
Trav6-1A0A075B5Z8 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trav6-1A0A075B5Z8 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC12.31□□□□□ -0.44
Trav6-1A0A075B5Z8 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC12.31□□□□□ -0.44
Trav6-1A0A075B5Z8 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-1A0A075B5Z8 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-1A0A075B5Z8 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-1A0A075B5Z8 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-1A0A075B5Z8 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trav6-1A0A075B5Z8 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Trav6-1A0A075B5Z8 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-1A0A075B5Z8 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trav6-1A0A075B5Z8 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-1A0A075B5Z8 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC12.31□□□□□ -0.44
Trav6-1A0A075B5Z8 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-1A0A075B5Z8 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.31□□□□□ -0.44
Trav6-1A0A075B5Z8 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trav6-1A0A075B5Z8 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-1A0A075B5Z8 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-1A0A075B5Z8 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-1A0A075B5Z8 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC12.3□□□□□ -0.44
Trav6-1A0A075B5Z8 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Trav6-1A0A075B5Z8 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-1A0A075B5Z8 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-1A0A075B5Z8 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC12.3□□□□□ -0.44
Trav6-1A0A075B5Z8 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-1A0A075B5Z8 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-1A0A075B5Z8 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
Trav6-1A0A075B5Z8 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-1A0A075B5Z8 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-1A0A075B5Z8 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-1A0A075B5Z8 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.3□□□□□ -0.44
Trav6-1A0A075B5Z8 AC167013.2-201ENSMUST00000228520 2684 ntBASIC12.3□□□□□ -0.44
Trav6-1A0A075B5Z8 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-1A0A075B5Z8 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-1A0A075B5Z8 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
Trav6-1A0A075B5Z8 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-1A0A075B5Z8 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-1A0A075B5Z8 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-1A0A075B5Z8 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-1A0A075B5Z8 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-1A0A075B5Z8 Gm10013-201ENSMUST00000106074 672 ntBASIC12.3□□□□□ -0.44
Trav6-1A0A075B5Z8 Gm6433-201ENSMUST00000118634 875 ntBASIC12.3□□□□□ -0.44
Trav6-1A0A075B5Z8 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-1A0A075B5Z8 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-1A0A075B5Z8 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-1A0A075B5Z8 Gm7286-201ENSMUST00000182691 1007 ntBASIC12.3□□□□□ -0.44
Trav6-1A0A075B5Z8 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-1A0A075B5Z8 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Trav6-1A0A075B5Z8 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-1A0A075B5Z8 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-1A0A075B5Z8 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-1A0A075B5Z8 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-1A0A075B5Z8 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-1A0A075B5Z8 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-1A0A075B5Z8 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Trav6-1A0A075B5Z8 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms