Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
NR1H4Q96RI1 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NR1H4Q96RI1 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NR1H4Q96RI1 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC17.21■□□□□ 0.35
NR1H4Q96RI1 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC17.21■□□□□ 0.35
NR1H4Q96RI1 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
NR1H4Q96RI1 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.21■□□□□ 0.35
NR1H4Q96RI1 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.21■□□□□ 0.35
NR1H4Q96RI1 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NR1H4Q96RI1 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NR1H4Q96RI1 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.21■□□□□ 0.35
NR1H4Q96RI1 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
NR1H4Q96RI1 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NR1H4Q96RI1 MTMR9LP-203ENST00000426597 1545 ntBASIC17.21■□□□□ 0.34
NR1H4Q96RI1 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.21■□□□□ 0.34
NR1H4Q96RI1 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
NR1H4Q96RI1 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NR1H4Q96RI1 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
NR1H4Q96RI1 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.2■□□□□ 0.34
NR1H4Q96RI1 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NR1H4Q96RI1 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NR1H4Q96RI1 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NR1H4Q96RI1 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
NR1H4Q96RI1 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
NR1H4Q96RI1 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.2■□□□□ 0.34
NR1H4Q96RI1 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.2■□□□□ 0.34
NR1H4Q96RI1 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
NR1H4Q96RI1 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NR1H4Q96RI1 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NR1H4Q96RI1 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NR1H4Q96RI1 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
NR1H4Q96RI1 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.2■□□□□ 0.34
NR1H4Q96RI1 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
NR1H4Q96RI1 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NR1H4Q96RI1 PARP1-202ENST00000366792 553 ntTSL 3 BASIC17.2■□□□□ 0.34
NR1H4Q96RI1 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC17.2■□□□□ 0.34
NR1H4Q96RI1 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC17.2■□□□□ 0.34
NR1H4Q96RI1 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
NR1H4Q96RI1 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NR1H4Q96RI1 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.2■□□□□ 0.34
NR1H4Q96RI1 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NR1H4Q96RI1 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
NR1H4Q96RI1 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NR1H4Q96RI1 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NR1H4Q96RI1 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
NR1H4Q96RI1 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
NR1H4Q96RI1 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NR1H4Q96RI1 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
NR1H4Q96RI1 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NR1H4Q96RI1 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
NR1H4Q96RI1 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NR1H4Q96RI1 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NR1H4Q96RI1 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NR1H4Q96RI1 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NR1H4Q96RI1 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.19■□□□□ 0.34
NR1H4Q96RI1 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.19■□□□□ 0.34
NR1H4Q96RI1 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
NR1H4Q96RI1 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
NR1H4Q96RI1 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC17.19■□□□□ 0.34
NR1H4Q96RI1 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.19■□□□□ 0.34
NR1H4Q96RI1 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
NR1H4Q96RI1 KRT18P61-201ENST00000585825 1298 ntBASIC17.19■□□□□ 0.34
NR1H4Q96RI1 MFSD11-216ENST00000590393 1141 ntBASIC17.19■□□□□ 0.34
NR1H4Q96RI1 NTF6G-201ENST00000591094 616 ntBASIC17.19■□□□□ 0.34
NR1H4Q96RI1 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.19■□□□□ 0.34
NR1H4Q96RI1 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
NR1H4Q96RI1 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NR1H4Q96RI1 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.19■□□□□ 0.34
NR1H4Q96RI1 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
NR1H4Q96RI1 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NR1H4Q96RI1 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.19■□□□□ 0.34
NR1H4Q96RI1 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
NR1H4Q96RI1 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.19■□□□□ 0.34
NR1H4Q96RI1 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
NR1H4Q96RI1 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
NR1H4Q96RI1 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NR1H4Q96RI1 AL138688.1-201ENST00000624851 1594 ntBASIC17.19■□□□□ 0.34
NR1H4Q96RI1 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NR1H4Q96RI1 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
NR1H4Q96RI1 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NR1H4Q96RI1 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NR1H4Q96RI1 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.19■□□□□ 0.34
NR1H4Q96RI1 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
NR1H4Q96RI1 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NR1H4Q96RI1 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.18■□□□□ 0.34
NR1H4Q96RI1 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NR1H4Q96RI1 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.18■□□□□ 0.34
NR1H4Q96RI1 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NR1H4Q96RI1 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
NR1H4Q96RI1 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NR1H4Q96RI1 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NR1H4Q96RI1 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
NR1H4Q96RI1 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.18■□□□□ 0.34
NR1H4Q96RI1 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NR1H4Q96RI1 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NR1H4Q96RI1 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.18■□□□□ 0.34
NR1H4Q96RI1 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
NR1H4Q96RI1 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NR1H4Q96RI1 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NR1H4Q96RI1 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms