Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC16.31■□□□□ 0.2
Lmcd1Q8VEE1 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lmcd1Q8VEE1 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lmcd1Q8VEE1 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.31■□□□□ 0.2
Lmcd1Q8VEE1 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lmcd1Q8VEE1 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lmcd1Q8VEE1 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lmcd1Q8VEE1 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lmcd1Q8VEE1 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lmcd1Q8VEE1 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Lmcd1Q8VEE1 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Lmcd1Q8VEE1 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lmcd1Q8VEE1 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Lmcd1Q8VEE1 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lmcd1Q8VEE1 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Lmcd1Q8VEE1 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lmcd1Q8VEE1 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC16.3■□□□□ 0.2
Lmcd1Q8VEE1 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Lmcd1Q8VEE1 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Lmcd1Q8VEE1 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lmcd1Q8VEE1 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Lmcd1Q8VEE1 Gm23984-201ENSMUST00000157139 203 ntBASIC16.3■□□□□ 0.2
Lmcd1Q8VEE1 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Lmcd1Q8VEE1 Gm18766-201ENSMUST00000189811 808 ntBASIC16.3■□□□□ 0.2
Lmcd1Q8VEE1 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC16.3■□□□□ 0.2
Lmcd1Q8VEE1 Gm6218-201ENSMUST00000219812 628 ntBASIC16.3■□□□□ 0.2
Lmcd1Q8VEE1 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC16.3■□□□□ 0.2
Lmcd1Q8VEE1 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lmcd1Q8VEE1 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.3■□□□□ 0.2
Lmcd1Q8VEE1 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lmcd1Q8VEE1 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Lmcd1Q8VEE1 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Lmcd1Q8VEE1 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lmcd1Q8VEE1 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.3■□□□□ 0.2
Lmcd1Q8VEE1 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lmcd1Q8VEE1 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Lmcd1Q8VEE1 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.29■□□□□ 0.2
Lmcd1Q8VEE1 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Lmcd1Q8VEE1 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lmcd1Q8VEE1 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Lmcd1Q8VEE1 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lmcd1Q8VEE1 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Lmcd1Q8VEE1 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lmcd1Q8VEE1 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Lmcd1Q8VEE1 Gm18018-201ENSMUST00000198273 408 ntBASIC16.29■□□□□ 0.2
Lmcd1Q8VEE1 Gm6007-201ENSMUST00000208170 823 ntBASIC16.29■□□□□ 0.2
Lmcd1Q8VEE1 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Lmcd1Q8VEE1 Rassf8-202ENSMUST00000058538 1131 ntBASIC16.29■□□□□ 0.2
Lmcd1Q8VEE1 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Lmcd1Q8VEE1 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.29■□□□□ 0.2
Lmcd1Q8VEE1 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lmcd1Q8VEE1 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lmcd1Q8VEE1 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lmcd1Q8VEE1 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Lmcd1Q8VEE1 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Lmcd1Q8VEE1 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Lmcd1Q8VEE1 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC16.28■□□□□ 0.2
Lmcd1Q8VEE1 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Lmcd1Q8VEE1 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC16.28■□□□□ 0.2
Lmcd1Q8VEE1 Gm43630-201ENSMUST00000201550 776 ntBASIC16.28■□□□□ 0.2
Lmcd1Q8VEE1 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lmcd1Q8VEE1 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Lmcd1Q8VEE1 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lmcd1Q8VEE1 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lmcd1Q8VEE1 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.28■□□□□ 0.2
Lmcd1Q8VEE1 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Lmcd1Q8VEE1 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lmcd1Q8VEE1 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC16.28■□□□□ 0.2
Lmcd1Q8VEE1 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Lmcd1Q8VEE1 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lmcd1Q8VEE1 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lmcd1Q8VEE1 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lmcd1Q8VEE1 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lmcd1Q8VEE1 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lmcd1Q8VEE1 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Lmcd1Q8VEE1 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lmcd1Q8VEE1 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lmcd1Q8VEE1 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Lmcd1Q8VEE1 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lmcd1Q8VEE1 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.27■□□□□ 0.2
Lmcd1Q8VEE1 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Lmcd1Q8VEE1 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lmcd1Q8VEE1 Gm8602-201ENSMUST00000184045 607 ntBASIC16.27■□□□□ 0.2
Lmcd1Q8VEE1 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC16.27■□□□□ 0.2
Lmcd1Q8VEE1 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lmcd1Q8VEE1 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Lmcd1Q8VEE1 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lmcd1Q8VEE1 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Lmcd1Q8VEE1 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Lmcd1Q8VEE1 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Lmcd1Q8VEE1 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.27■□□□□ 0.2
Lmcd1Q8VEE1 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Lmcd1Q8VEE1 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Lmcd1Q8VEE1 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Lmcd1Q8VEE1 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Lmcd1Q8VEE1 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Lmcd1Q8VEE1 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lmcd1Q8VEE1 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC16.26■□□□□ 0.19
Lmcd1Q8VEE1 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lmcd1Q8VEE1 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms