Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim63Q38HM4 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim63Q38HM4 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.7□□□□□ -0.38
Trim63Q38HM4 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim63Q38HM4 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim63Q38HM4 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim63Q38HM4 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.7□□□□□ -0.38
Trim63Q38HM4 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim63Q38HM4 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.7□□□□□ -0.38
Trim63Q38HM4 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim63Q38HM4 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
Trim63Q38HM4 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim63Q38HM4 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim63Q38HM4 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim63Q38HM4 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.7□□□□□ -0.38
Trim63Q38HM4 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Trim63Q38HM4 Gm43137-201ENSMUST00000198052 594 ntBASIC12.7□□□□□ -0.38
Trim63Q38HM4 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Trim63Q38HM4 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim63Q38HM4 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.7□□□□□ -0.38
Trim63Q38HM4 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim63Q38HM4 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.7□□□□□ -0.38
Trim63Q38HM4 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim63Q38HM4 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim63Q38HM4 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim63Q38HM4 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim63Q38HM4 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim63Q38HM4 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim63Q38HM4 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim63Q38HM4 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim63Q38HM4 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim63Q38HM4 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim63Q38HM4 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim63Q38HM4 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.69□□□□□ -0.38
Trim63Q38HM4 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim63Q38HM4 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim63Q38HM4 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trim63Q38HM4 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim63Q38HM4 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim63Q38HM4 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim63Q38HM4 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim63Q38HM4 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trim63Q38HM4 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim63Q38HM4 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
Trim63Q38HM4 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trim63Q38HM4 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim63Q38HM4 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim63Q38HM4 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Trim63Q38HM4 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim63Q38HM4 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trim63Q38HM4 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC12.69□□□□□ -0.38
Trim63Q38HM4 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim63Q38HM4 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC12.69□□□□□ -0.38
Trim63Q38HM4 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim63Q38HM4 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim63Q38HM4 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim63Q38HM4 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.69□□□□□ -0.38
Trim63Q38HM4 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim63Q38HM4 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Trim63Q38HM4 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim63Q38HM4 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim63Q38HM4 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim63Q38HM4 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim63Q38HM4 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim63Q38HM4 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim63Q38HM4 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim63Q38HM4 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim63Q38HM4 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim63Q38HM4 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim63Q38HM4 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trim63Q38HM4 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim63Q38HM4 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim63Q38HM4 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Trim63Q38HM4 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim63Q38HM4 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trim63Q38HM4 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim63Q38HM4 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim63Q38HM4 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.68□□□□□ -0.38
Trim63Q38HM4 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim63Q38HM4 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim63Q38HM4 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Trim63Q38HM4 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim63Q38HM4 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim63Q38HM4 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim63Q38HM4 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim63Q38HM4 Gm15039-201ENSMUST00000118914 875 ntBASIC12.68□□□□□ -0.38
Trim63Q38HM4 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC12.68□□□□□ -0.38
Trim63Q38HM4 Rps24-207ENSMUST00000224568 714 ntBASIC12.68□□□□□ -0.38
Trim63Q38HM4 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim63Q38HM4 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trim63Q38HM4 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC12.68□□□□□ -0.38
Trim63Q38HM4 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim63Q38HM4 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim63Q38HM4 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim63Q38HM4 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim63Q38HM4 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim63Q38HM4 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim63Q38HM4 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.68□□□□□ -0.38
Trim63Q38HM4 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim63Q38HM4 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms