Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn1bP97952 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Scn1bP97952 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn1bP97952 Gm13181-201ENSMUST00000120117 1069 ntBASIC14.07□□□□□ -0.16
Scn1bP97952 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC14.07□□□□□ -0.16
Scn1bP97952 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC14.07□□□□□ -0.16
Scn1bP97952 Gm27463-201ENSMUST00000183569 57 ntBASIC14.07□□□□□ -0.16
Scn1bP97952 Gm3375-201ENSMUST00000203929 796 ntBASIC14.07□□□□□ -0.16
Scn1bP97952 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Scn1bP97952 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Scn1bP97952 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn1bP97952 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn1bP97952 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn1bP97952 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn1bP97952 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Scn1bP97952 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn1bP97952 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Scn1bP97952 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn1bP97952 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn1bP97952 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn1bP97952 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Scn1bP97952 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn1bP97952 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn1bP97952 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Scn1bP97952 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn1bP97952 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn1bP97952 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.06□□□□□ -0.16
Scn1bP97952 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Scn1bP97952 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn1bP97952 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn1bP97952 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Scn1bP97952 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn1bP97952 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn1bP97952 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn1bP97952 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Scn1bP97952 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn1bP97952 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn1bP97952 Gm5417-201ENSMUST00000079706 384 ntBASIC14.06□□□□□ -0.16
Scn1bP97952 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn1bP97952 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Scn1bP97952 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn1bP97952 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.06□□□□□ -0.16
Scn1bP97952 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn1bP97952 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn1bP97952 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.06□□□□□ -0.16
Scn1bP97952 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn1bP97952 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn1bP97952 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn1bP97952 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Scn1bP97952 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn1bP97952 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn1bP97952 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Scn1bP97952 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.06□□□□□ -0.16
Scn1bP97952 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Scn1bP97952 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Scn1bP97952 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn1bP97952 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn1bP97952 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn1bP97952 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Scn1bP97952 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Scn1bP97952 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC14.05□□□□□ -0.16
Scn1bP97952 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC14.05□□□□□ -0.16
Scn1bP97952 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
Scn1bP97952 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC14.05□□□□□ -0.16
Scn1bP97952 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn1bP97952 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn1bP97952 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Scn1bP97952 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Scn1bP97952 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Scn1bP97952 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC14.05□□□□□ -0.16
Scn1bP97952 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn1bP97952 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.05□□□□□ -0.16
Scn1bP97952 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn1bP97952 Zfp264-201ENSMUST00000208656 1563 ntBASIC14.05□□□□□ -0.16
Scn1bP97952 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn1bP97952 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn1bP97952 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Scn1bP97952 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn1bP97952 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn1bP97952 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
Scn1bP97952 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn1bP97952 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn1bP97952 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn1bP97952 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn1bP97952 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Scn1bP97952 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn1bP97952 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC14.04□□□□□ -0.16
Scn1bP97952 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC14.04□□□□□ -0.16
Scn1bP97952 Mir5122-201ENSMUST00000175004 89 ntBASIC14.04□□□□□ -0.16
Scn1bP97952 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC14.04□□□□□ -0.16
Scn1bP97952 Gm43353-201ENSMUST00000199224 1295 ntBASIC14.04□□□□□ -0.16
Scn1bP97952 AC135963.1-201ENSMUST00000211640 717 ntBASIC14.04□□□□□ -0.16
Scn1bP97952 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn1bP97952 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Scn1bP97952 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Scn1bP97952 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Scn1bP97952 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn1bP97952 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Scn1bP97952 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn1bP97952 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms