Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC17.16■□□□□ 0.34
Tpm1P58771 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.16■□□□□ 0.34
Tpm1P58771 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tpm1P58771 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tpm1P58771 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tpm1P58771 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tpm1P58771 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tpm1P58771 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tpm1P58771 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tpm1P58771 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tpm1P58771 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tpm1P58771 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tpm1P58771 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tpm1P58771 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Tpm1P58771 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tpm1P58771 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Tpm1P58771 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Tpm1P58771 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Tpm1P58771 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tpm1P58771 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.15■□□□□ 0.34
Tpm1P58771 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.15■□□□□ 0.34
Tpm1P58771 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.15■□□□□ 0.34
Tpm1P58771 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Tpm1P58771 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tpm1P58771 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tpm1P58771 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC17.15■□□□□ 0.34
Tpm1P58771 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tpm1P58771 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tpm1P58771 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tpm1P58771 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tpm1P58771 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Tpm1P58771 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Tpm1P58771 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC17.15■□□□□ 0.34
Tpm1P58771 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tpm1P58771 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Tpm1P58771 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tpm1P58771 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Tpm1P58771 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Tpm1P58771 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tpm1P58771 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
Tpm1P58771 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tpm1P58771 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Tpm1P58771 Gm27011-201ENSMUST00000182352 972 ntBASIC17.14■□□□□ 0.33
Tpm1P58771 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tpm1P58771 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.14■□□□□ 0.33
Tpm1P58771 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tpm1P58771 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.14■□□□□ 0.33
Tpm1P58771 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tpm1P58771 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Tpm1P58771 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Tpm1P58771 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tpm1P58771 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tpm1P58771 Gm10710-201ENSMUST00000047876 3971 ntBASIC17.13■□□□□ 0.33
Tpm1P58771 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Tpm1P58771 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tpm1P58771 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tpm1P58771 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tpm1P58771 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tpm1P58771 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tpm1P58771 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tpm1P58771 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tpm1P58771 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Tpm1P58771 Gm11355-201ENSMUST00000121120 306 ntBASIC17.13■□□□□ 0.33
Tpm1P58771 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.13■□□□□ 0.33
Tpm1P58771 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tpm1P58771 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tpm1P58771 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tpm1P58771 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tpm1P58771 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
Tpm1P58771 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Tpm1P58771 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tpm1P58771 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tpm1P58771 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tpm1P58771 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tpm1P58771 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tpm1P58771 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tpm1P58771 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Tpm1P58771 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tpm1P58771 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tpm1P58771 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tpm1P58771 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tpm1P58771 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC17.12■□□□□ 0.33
Tpm1P58771 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tpm1P58771 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.12■□□□□ 0.33
Tpm1P58771 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.12■□□□□ 0.33
Tpm1P58771 Gm21559-201ENSMUST00000220638 855 ntBASIC17.12■□□□□ 0.33
Tpm1P58771 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tpm1P58771 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tpm1P58771 Gm8587-201ENSMUST00000076538 843 ntBASIC17.12■□□□□ 0.33
Tpm1P58771 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tpm1P58771 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Tpm1P58771 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Tpm1P58771 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tpm1P58771 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tpm1P58771 Sorbs3-204ENSMUST00000227929 2460 ntBASIC17.12■□□□□ 0.33
Tpm1P58771 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tpm1P58771 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tpm1P58771 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tpm1P58771 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Tpm1P58771 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms