Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm42900-201ENSMUST00000197184 2167 ntBASIC15.62■□□□□ 0.09
Sox1P53783 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Sox1P53783 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Sox1P53783 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sox1P53783 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sox1P53783 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sox1P53783 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sox1P53783 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.61■□□□□ 0.09
Sox1P53783 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.61■□□□□ 0.09
Sox1P53783 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sox1P53783 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sox1P53783 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sox1P53783 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sox1P53783 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC15.61■□□□□ 0.09
Sox1P53783 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Sox1P53783 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC15.61■□□□□ 0.09
Sox1P53783 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sox1P53783 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sox1P53783 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Sox1P53783 Olfr582-201ENSMUST00000098212 960 ntBASIC15.61■□□□□ 0.09
Sox1P53783 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Sox1P53783 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Sox1P53783 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sox1P53783 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Sox1P53783 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Sox1P53783 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sox1P53783 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sox1P53783 Gm7669-201ENSMUST00000210184 1603 ntBASIC15.61■□□□□ 0.09
Sox1P53783 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Sox1P53783 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sox1P53783 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sox1P53783 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sox1P53783 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.6■□□□□ 0.09
Sox1P53783 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Sox1P53783 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sox1P53783 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sox1P53783 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sox1P53783 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sox1P53783 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sox1P53783 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sox1P53783 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Sox1P53783 Gm43808-201ENSMUST00000202534 2065 ntBASIC15.6■□□□□ 0.09
Sox1P53783 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sox1P53783 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Sox1P53783 Gm13392-201ENSMUST00000117708 150 ntBASIC15.6■□□□□ 0.09
Sox1P53783 Gm4875-201ENSMUST00000118257 786 ntBASIC15.6■□□□□ 0.09
Sox1P53783 Gm12960-201ENSMUST00000120017 1066 ntBASIC15.6■□□□□ 0.09
Sox1P53783 Gm12329-201ENSMUST00000120829 1007 ntBASIC15.6■□□□□ 0.09
Sox1P53783 Cd63-ps-201ENSMUST00000145417 875 ntBASIC15.6■□□□□ 0.09
Sox1P53783 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Sox1P53783 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
Sox1P53783 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sox1P53783 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Sox1P53783 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sox1P53783 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Sox1P53783 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sox1P53783 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sox1P53783 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sox1P53783 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sox1P53783 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sox1P53783 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sox1P53783 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sox1P53783 Gm9200-201ENSMUST00000118513 1354 ntBASIC15.6■□□□□ 0.09
Sox1P53783 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sox1P53783 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sox1P53783 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC15.6■□□□□ 0.09
Sox1P53783 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox1P53783 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox1P53783 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Sox1P53783 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox1P53783 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox1P53783 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC15.59■□□□□ 0.09
Sox1P53783 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox1P53783 Gm4984-201ENSMUST00000115987 360 ntBASIC15.59■□□□□ 0.09
Sox1P53783 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox1P53783 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC15.59■□□□□ 0.09
Sox1P53783 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Sox1P53783 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC15.59■□□□□ 0.09
Sox1P53783 AC154171.1-201ENSMUST00000224610 643 ntBASIC15.59■□□□□ 0.09
Sox1P53783 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox1P53783 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox1P53783 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox1P53783 Gm5898-201ENSMUST00000121016 2071 ntBASIC15.59■□□□□ 0.09
Sox1P53783 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox1P53783 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox1P53783 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox1P53783 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox1P53783 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox1P53783 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox1P53783 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox1P53783 Gm5320-201ENSMUST00000207163 1519 ntBASIC15.58■□□□□ 0.09
Sox1P53783 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Sox1P53783 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Sox1P53783 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
Sox1P53783 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Sox1P53783 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sox1P53783 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Sox1P53783 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sox1P53783 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC15.58■□□□□ 0.08
Sox1P53783 Gm15198-201ENSMUST00000117283 177 ntBASIC15.58■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms