Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Trdmt1O55055 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Trdmt1O55055 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Trdmt1O55055 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC16.84■□□□□ 0.29
Trdmt1O55055 Gm13223-201ENSMUST00000118609 747 ntBASIC16.84■□□□□ 0.29
Trdmt1O55055 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC16.84■□□□□ 0.29
Trdmt1O55055 Gm38225-201ENSMUST00000194001 393 ntBASIC16.84■□□□□ 0.29
Trdmt1O55055 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trdmt1O55055 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC16.84■□□□□ 0.29
Trdmt1O55055 Gm5186-201ENSMUST00000218781 920 ntBASIC16.84■□□□□ 0.29
Trdmt1O55055 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trdmt1O55055 CT009510.1-201ENSMUST00000227972 270 ntBASIC16.84■□□□□ 0.29
Trdmt1O55055 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC16.84■□□□□ 0.29
Trdmt1O55055 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trdmt1O55055 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trdmt1O55055 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trdmt1O55055 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trdmt1O55055 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trdmt1O55055 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trdmt1O55055 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trdmt1O55055 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trdmt1O55055 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trdmt1O55055 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trdmt1O55055 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trdmt1O55055 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trdmt1O55055 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trdmt1O55055 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC16.84■□□□□ 0.29
Trdmt1O55055 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trdmt1O55055 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trdmt1O55055 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trdmt1O55055 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
Trdmt1O55055 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
Trdmt1O55055 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Trdmt1O55055 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC16.83■□□□□ 0.28
Trdmt1O55055 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC16.83■□□□□ 0.28
Trdmt1O55055 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC16.83■□□□□ 0.28
Trdmt1O55055 Gm6415-201ENSMUST00000118488 348 ntBASIC16.83■□□□□ 0.28
Trdmt1O55055 Gm15483-201ENSMUST00000120338 456 ntBASIC16.83■□□□□ 0.28
Trdmt1O55055 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trdmt1O55055 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC16.83■□□□□ 0.28
Trdmt1O55055 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Trdmt1O55055 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC16.83■□□□□ 0.28
Trdmt1O55055 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trdmt1O55055 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trdmt1O55055 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC16.83■□□□□ 0.28
Trdmt1O55055 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trdmt1O55055 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trdmt1O55055 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trdmt1O55055 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trdmt1O55055 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Trdmt1O55055 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trdmt1O55055 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trdmt1O55055 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trdmt1O55055 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.82■□□□□ 0.28
Trdmt1O55055 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.82■□□□□ 0.28
Trdmt1O55055 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trdmt1O55055 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trdmt1O55055 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trdmt1O55055 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trdmt1O55055 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.82■□□□□ 0.28
Trdmt1O55055 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trdmt1O55055 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.82■□□□□ 0.28
Trdmt1O55055 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC16.82■□□□□ 0.28
Trdmt1O55055 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trdmt1O55055 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trdmt1O55055 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trdmt1O55055 Gm9824-201ENSMUST00000178707 561 ntBASIC16.82■□□□□ 0.28
Trdmt1O55055 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trdmt1O55055 CT025535.1-201ENSMUST00000227172 491 ntBASIC16.82■□□□□ 0.28
Trdmt1O55055 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trdmt1O55055 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trdmt1O55055 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Trdmt1O55055 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trdmt1O55055 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Trdmt1O55055 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.82■□□□□ 0.28
Trdmt1O55055 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trdmt1O55055 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trdmt1O55055 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trdmt1O55055 Gm8096-201ENSMUST00000209921 1591 ntBASIC16.81■□□□□ 0.28
Trdmt1O55055 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trdmt1O55055 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC16.81■□□□□ 0.28
Trdmt1O55055 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trdmt1O55055 Gm12428-201ENSMUST00000119844 727 ntBASIC16.81■□□□□ 0.28
Trdmt1O55055 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trdmt1O55055 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trdmt1O55055 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trdmt1O55055 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trdmt1O55055 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trdmt1O55055 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trdmt1O55055 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trdmt1O55055 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trdmt1O55055 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trdmt1O55055 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trdmt1O55055 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trdmt1O55055 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trdmt1O55055 Gm42934-201ENSMUST00000196920 1345 ntBASIC16.8■□□□□ 0.28
Trdmt1O55055 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trdmt1O55055 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC16.8■□□□□ 0.28
Trdmt1O55055 Gm27306-201ENSMUST00000183970 107 ntBASIC16.8■□□□□ 0.28
Trdmt1O55055 Mir6977-201ENSMUST00000184960 64 ntBASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms