Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Stx1aO35526 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Stx1aO35526 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Stx1aO35526 Gm10013-201ENSMUST00000106074 672 ntBASIC17.27■□□□□ 0.36
Stx1aO35526 Gm4609-201ENSMUST00000106443 1002 ntBASIC17.27■□□□□ 0.36
Stx1aO35526 Gm5138-201ENSMUST00000113842 1002 ntBASIC17.27■□□□□ 0.36
Stx1aO35526 Gm15191-201ENSMUST00000117933 1000 ntBASIC17.27■□□□□ 0.36
Stx1aO35526 Gm12182-201ENSMUST00000118655 1008 ntBASIC17.27■□□□□ 0.36
Stx1aO35526 Gm13882-201ENSMUST00000120886 1002 ntBASIC17.27■□□□□ 0.36
Stx1aO35526 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Stx1aO35526 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Stx1aO35526 Gm10284-201ENSMUST00000145057 1005 ntBASIC17.27■□□□□ 0.36
Stx1aO35526 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Stx1aO35526 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Stx1aO35526 Gm10481-201ENSMUST00000179228 1002 ntBASIC17.27■□□□□ 0.36
Stx1aO35526 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC17.27■□□□□ 0.36
Stx1aO35526 Gm2574-201ENSMUST00000181051 1002 ntBASIC17.27■□□□□ 0.36
Stx1aO35526 Gm3200-201ENSMUST00000181493 1002 ntBASIC17.27■□□□□ 0.36
Stx1aO35526 Gm8825-201ENSMUST00000182565 998 ntBASIC17.27■□□□□ 0.36
Stx1aO35526 Gm4518-201ENSMUST00000182638 718 ntBASIC17.27■□□□□ 0.36
Stx1aO35526 Gm8330-201ENSMUST00000182754 1008 ntBASIC17.27■□□□□ 0.36
Stx1aO35526 Gm4575-201ENSMUST00000182991 1002 ntBASIC17.27■□□□□ 0.36
Stx1aO35526 Gm8709-201ENSMUST00000183230 1012 ntBASIC17.27■□□□□ 0.36
Stx1aO35526 AC160980.1-201ENSMUST00000224136 970 ntBASIC17.27■□□□□ 0.36
Stx1aO35526 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Stx1aO35526 Gm10293-201ENSMUST00000076317 1002 ntBASIC17.27■□□□□ 0.36
Stx1aO35526 Gm6316-201ENSMUST00000082064 1020 ntBASIC17.27■□□□□ 0.36
Stx1aO35526 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Stx1aO35526 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Stx1aO35526 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Stx1aO35526 Gm45504-201ENSMUST00000211407 2107 ntBASIC17.27■□□□□ 0.35
Stx1aO35526 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Stx1aO35526 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Stx1aO35526 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.35
Stx1aO35526 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Stx1aO35526 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Stx1aO35526 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Stx1aO35526 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Stx1aO35526 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.26■□□□□ 0.35
Stx1aO35526 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Stx1aO35526 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Stx1aO35526 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Stx1aO35526 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Stx1aO35526 Gm12134-201ENSMUST00000122109 520 ntBASIC17.26■□□□□ 0.35
Stx1aO35526 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Stx1aO35526 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Stx1aO35526 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Stx1aO35526 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Stx1aO35526 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Stx1aO35526 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Stx1aO35526 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Stx1aO35526 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Stx1aO35526 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC17.26■□□□□ 0.35
Stx1aO35526 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Stx1aO35526 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC17.26■□□□□ 0.35
Stx1aO35526 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Stx1aO35526 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Stx1aO35526 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Stx1aO35526 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Stx1aO35526 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Stx1aO35526 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Stx1aO35526 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Stx1aO35526 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Stx1aO35526 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Stx1aO35526 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Stx1aO35526 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Stx1aO35526 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Stx1aO35526 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC17.25■□□□□ 0.35
Stx1aO35526 Gm13312-201ENSMUST00000119631 718 ntBASIC17.25■□□□□ 0.35
Stx1aO35526 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
Stx1aO35526 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.25■□□□□ 0.35
Stx1aO35526 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Stx1aO35526 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Stx1aO35526 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Stx1aO35526 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Stx1aO35526 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Stx1aO35526 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Stx1aO35526 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Stx1aO35526 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Stx1aO35526 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Stx1aO35526 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
Stx1aO35526 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Stx1aO35526 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Stx1aO35526 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Stx1aO35526 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Stx1aO35526 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
Stx1aO35526 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Stx1aO35526 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC17.24■□□□□ 0.35
Stx1aO35526 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC17.24■□□□□ 0.35
Stx1aO35526 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Stx1aO35526 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Stx1aO35526 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Stx1aO35526 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Stx1aO35526 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Stx1aO35526 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Stx1aO35526 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.24■□□□□ 0.35
Stx1aO35526 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Stx1aO35526 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Stx1aO35526 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Stx1aO35526 Gm6345-202ENSMUST00000180900 204 ntBASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms