Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh1F7BJK1 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh1F7BJK1 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh1F7BJK1 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh1F7BJK1 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh1F7BJK1 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh1F7BJK1 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh1F7BJK1 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh1F7BJK1 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh1F7BJK1 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC13.84□□□□□ -0.19
Pcdh1F7BJK1 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh1F7BJK1 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh1F7BJK1 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC13.84□□□□□ -0.19
Pcdh1F7BJK1 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Pcdh1F7BJK1 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh1F7BJK1 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
Pcdh1F7BJK1 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh1F7BJK1 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh1F7BJK1 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Pcdh1F7BJK1 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh1F7BJK1 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh1F7BJK1 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh1F7BJK1 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh1F7BJK1 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC13.84□□□□□ -0.19
Pcdh1F7BJK1 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh1F7BJK1 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC13.84□□□□□ -0.19
Pcdh1F7BJK1 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Pcdh1F7BJK1 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Pcdh1F7BJK1 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh1F7BJK1 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh1F7BJK1 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh1F7BJK1 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh1F7BJK1 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh1F7BJK1 Gm14722-201ENSMUST00000118943 689 ntBASIC13.83□□□□□ -0.2
Pcdh1F7BJK1 Gm9013-201ENSMUST00000132939 882 ntBASIC13.83□□□□□ -0.2
Pcdh1F7BJK1 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC13.83□□□□□ -0.2
Pcdh1F7BJK1 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh1F7BJK1 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh1F7BJK1 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh1F7BJK1 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh1F7BJK1 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh1F7BJK1 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh1F7BJK1 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh1F7BJK1 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh1F7BJK1 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh1F7BJK1 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh1F7BJK1 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh1F7BJK1 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh1F7BJK1 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh1F7BJK1 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh1F7BJK1 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh1F7BJK1 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh1F7BJK1 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC13.82□□□□□ -0.2
Pcdh1F7BJK1 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh1F7BJK1 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Pcdh1F7BJK1 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh1F7BJK1 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh1F7BJK1 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Pcdh1F7BJK1 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh1F7BJK1 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Pcdh1F7BJK1 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh1F7BJK1 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh1F7BJK1 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh1F7BJK1 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh1F7BJK1 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh1F7BJK1 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC13.82□□□□□ -0.2
Pcdh1F7BJK1 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC13.82□□□□□ -0.2
Pcdh1F7BJK1 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh1F7BJK1 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Pcdh1F7BJK1 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh1F7BJK1 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh1F7BJK1 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.82□□□□□ -0.2
Pcdh1F7BJK1 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh1F7BJK1 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh1F7BJK1 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
Pcdh1F7BJK1 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh1F7BJK1 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh1F7BJK1 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh1F7BJK1 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh1F7BJK1 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh1F7BJK1 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh1F7BJK1 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh1F7BJK1 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh1F7BJK1 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.81□□□□□ -0.2
Pcdh1F7BJK1 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh1F7BJK1 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh1F7BJK1 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh1F7BJK1 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Pcdh1F7BJK1 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh1F7BJK1 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh1F7BJK1 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh1F7BJK1 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Pcdh1F7BJK1 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh1F7BJK1 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh1F7BJK1 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh1F7BJK1 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Pcdh1F7BJK1 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Pcdh1F7BJK1 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh1F7BJK1 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh1F7BJK1 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms