Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Gm9856-201ENSMUST00000217077 2578 ntBASIC11.99□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv13-3A0A0B4J1H2 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC11.99□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC11.98□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Gm13337-201ENSMUST00000119183 1594 ntBASIC11.98□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC11.98□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Gm14722-201ENSMUST00000118943 689 ntBASIC11.98□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC11.98□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC11.98□□□□□ -0.49
Trbv13-3A0A0B4J1H2 AC175538.1-201ENSMUST00000225343 1269 ntBASIC11.98□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC11.98□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Trbv13-3A0A0B4J1H2 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC11.97□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC11.97□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC11.97□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Gm44645-201ENSMUST00000205492 1653 ntBASIC11.97□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv13-3A0A0B4J1H2 CT030684.3-201ENSMUST00000227308 2445 ntBASIC11.97□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC11.97□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC11.97□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Gm12441-201ENSMUST00000121806 588 ntBASIC11.97□□□□□ -0.49
Trbv13-3A0A0B4J1H2 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC11.97□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC11.97□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Trmt13-210ENSMUST00000198454 880 ntBASIC11.97□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv13-3A0A0B4J1H2 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Gm10605-202ENSMUST00000183019 3198 ntBASIC11.97□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trbv13-3A0A0B4J1H2 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trbv13-3A0A0B4J1H2 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC11.96□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC11.96□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trbv13-3A0A0B4J1H2 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC11.96□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trbv13-3A0A0B4J1H2 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Gm37856-201ENSMUST00000191634 999 ntBASIC11.96□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trbv13-3A0A0B4J1H2 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Gm38058-201ENSMUST00000194323 4368 ntBASIC11.96□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms