Protein–RNA interactions for Protein: Q9Z2C6

Upk1b, Uroplakin-1b, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1bQ9Z2C6 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC14.29□□□□□ -0.12
Upk1bQ9Z2C6 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Upk1bQ9Z2C6 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upk1bQ9Z2C6 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Upk1bQ9Z2C6 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upk1bQ9Z2C6 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.29□□□□□ -0.12
Upk1bQ9Z2C6 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upk1bQ9Z2C6 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upk1bQ9Z2C6 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upk1bQ9Z2C6 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upk1bQ9Z2C6 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upk1bQ9Z2C6 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Upk1bQ9Z2C6 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Upk1bQ9Z2C6 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Upk1bQ9Z2C6 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Upk1bQ9Z2C6 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.28□□□□□ -0.12
Upk1bQ9Z2C6 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Upk1bQ9Z2C6 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Upk1bQ9Z2C6 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Upk1bQ9Z2C6 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Upk1bQ9Z2C6 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Upk1bQ9Z2C6 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Upk1bQ9Z2C6 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Upk1bQ9Z2C6 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.28□□□□□ -0.12
Upk1bQ9Z2C6 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Upk1bQ9Z2C6 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.28□□□□□ -0.12
Upk1bQ9Z2C6 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Upk1bQ9Z2C6 Gm21559-201ENSMUST00000220638 855 ntBASIC14.28□□□□□ -0.12
Upk1bQ9Z2C6 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.28□□□□□ -0.12
Upk1bQ9Z2C6 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Upk1bQ9Z2C6 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Upk1bQ9Z2C6 Gm9987-201ENSMUST00000069768 567 ntBASIC14.28□□□□□ -0.12
Upk1bQ9Z2C6 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Upk1bQ9Z2C6 Gm8587-201ENSMUST00000076538 843 ntBASIC14.28□□□□□ -0.12
Upk1bQ9Z2C6 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Upk1bQ9Z2C6 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Upk1bQ9Z2C6 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.28□□□□□ -0.12
Upk1bQ9Z2C6 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Upk1bQ9Z2C6 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Upk1bQ9Z2C6 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Upk1bQ9Z2C6 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Upk1bQ9Z2C6 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Upk1bQ9Z2C6 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Upk1bQ9Z2C6 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Upk1bQ9Z2C6 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Upk1bQ9Z2C6 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Upk1bQ9Z2C6 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Upk1bQ9Z2C6 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Upk1bQ9Z2C6 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.27□□□□□ -0.12
Upk1bQ9Z2C6 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.27□□□□□ -0.12
Upk1bQ9Z2C6 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Upk1bQ9Z2C6 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Upk1bQ9Z2C6 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Upk1bQ9Z2C6 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Upk1bQ9Z2C6 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
Upk1bQ9Z2C6 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Upk1bQ9Z2C6 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Upk1bQ9Z2C6 Gm9484-201ENSMUST00000195892 1159 ntBASIC14.27□□□□□ -0.13
Upk1bQ9Z2C6 Gm18959-201ENSMUST00000208954 655 ntBASIC14.27□□□□□ -0.13
Upk1bQ9Z2C6 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Upk1bQ9Z2C6 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Upk1bQ9Z2C6 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Upk1bQ9Z2C6 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Upk1bQ9Z2C6 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Upk1bQ9Z2C6 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Upk1bQ9Z2C6 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Upk1bQ9Z2C6 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Upk1bQ9Z2C6 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Upk1bQ9Z2C6 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Upk1bQ9Z2C6 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Upk1bQ9Z2C6 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Upk1bQ9Z2C6 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk1bQ9Z2C6 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk1bQ9Z2C6 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Upk1bQ9Z2C6 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk1bQ9Z2C6 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Upk1bQ9Z2C6 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk1bQ9Z2C6 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk1bQ9Z2C6 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk1bQ9Z2C6 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Upk1bQ9Z2C6 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Upk1bQ9Z2C6 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk1bQ9Z2C6 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk1bQ9Z2C6 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Upk1bQ9Z2C6 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk1bQ9Z2C6 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk1bQ9Z2C6 Gm11355-201ENSMUST00000121120 306 ntBASIC14.26□□□□□ -0.13
Upk1bQ9Z2C6 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.26□□□□□ -0.13
Upk1bQ9Z2C6 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Upk1bQ9Z2C6 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk1bQ9Z2C6 Gm37055-201ENSMUST00000191866 133 ntBASIC14.26□□□□□ -0.13
Upk1bQ9Z2C6 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC14.26□□□□□ -0.13
Upk1bQ9Z2C6 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk1bQ9Z2C6 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk1bQ9Z2C6 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk1bQ9Z2C6 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk1bQ9Z2C6 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk1bQ9Z2C6 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk1bQ9Z2C6 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk1bQ9Z2C6 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms