Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Hmgn3Q9DCB1 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hmgn3Q9DCB1 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Hmgn3Q9DCB1 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hmgn3Q9DCB1 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hmgn3Q9DCB1 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC14.47□□□□□ -0.09
Hmgn3Q9DCB1 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14.47□□□□□ -0.09
Hmgn3Q9DCB1 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14.47□□□□□ -0.09
Hmgn3Q9DCB1 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.47□□□□□ -0.09
Hmgn3Q9DCB1 Gm3375-201ENSMUST00000203929 796 ntBASIC14.47□□□□□ -0.09
Hmgn3Q9DCB1 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Hmgn3Q9DCB1 Gm7367-201ENSMUST00000057611 492 ntBASIC14.47□□□□□ -0.09
Hmgn3Q9DCB1 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hmgn3Q9DCB1 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Hmgn3Q9DCB1 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hmgn3Q9DCB1 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Hmgn3Q9DCB1 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hmgn3Q9DCB1 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hmgn3Q9DCB1 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Hmgn3Q9DCB1 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hmgn3Q9DCB1 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Hmgn3Q9DCB1 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hmgn3Q9DCB1 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hmgn3Q9DCB1 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Hmgn3Q9DCB1 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hmgn3Q9DCB1 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hmgn3Q9DCB1 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hmgn3Q9DCB1 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hmgn3Q9DCB1 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hmgn3Q9DCB1 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Hmgn3Q9DCB1 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hmgn3Q9DCB1 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hmgn3Q9DCB1 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hmgn3Q9DCB1 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Hmgn3Q9DCB1 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Hmgn3Q9DCB1 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.46□□□□□ -0.09
Hmgn3Q9DCB1 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Hmgn3Q9DCB1 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hmgn3Q9DCB1 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.46□□□□□ -0.09
Hmgn3Q9DCB1 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Hmgn3Q9DCB1 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hmgn3Q9DCB1 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hmgn3Q9DCB1 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Hmgn3Q9DCB1 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hmgn3Q9DCB1 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Hmgn3Q9DCB1 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hmgn3Q9DCB1 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hmgn3Q9DCB1 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hmgn3Q9DCB1 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hmgn3Q9DCB1 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hmgn3Q9DCB1 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hmgn3Q9DCB1 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Hmgn3Q9DCB1 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Hmgn3Q9DCB1 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Hmgn3Q9DCB1 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.46□□□□□ -0.1
Hmgn3Q9DCB1 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Hmgn3Q9DCB1 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Hmgn3Q9DCB1 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Hmgn3Q9DCB1 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hmgn3Q9DCB1 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.45□□□□□ -0.1
Hmgn3Q9DCB1 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hmgn3Q9DCB1 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hmgn3Q9DCB1 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hmgn3Q9DCB1 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hmgn3Q9DCB1 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Hmgn3Q9DCB1 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Hmgn3Q9DCB1 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hmgn3Q9DCB1 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hmgn3Q9DCB1 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hmgn3Q9DCB1 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC14.45□□□□□ -0.1
Hmgn3Q9DCB1 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.45□□□□□ -0.1
Hmgn3Q9DCB1 Gm22240-201ENSMUST00000175225 82 ntBASIC14.45□□□□□ -0.1
Hmgn3Q9DCB1 Gm27011-201ENSMUST00000182352 972 ntBASIC14.45□□□□□ -0.1
Hmgn3Q9DCB1 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.45□□□□□ -0.1
Hmgn3Q9DCB1 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hmgn3Q9DCB1 Gm21814-202ENSMUST00000203277 873 ntBASIC14.45□□□□□ -0.1
Hmgn3Q9DCB1 Arhgef4-208ENSMUST00000211073 171 ntBASIC14.45□□□□□ -0.1
Hmgn3Q9DCB1 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.45□□□□□ -0.1
Hmgn3Q9DCB1 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hmgn3Q9DCB1 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hmgn3Q9DCB1 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Hmgn3Q9DCB1 Gm10812-201ENSMUST00000099864 546 ntBASIC14.45□□□□□ -0.1
Hmgn3Q9DCB1 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hmgn3Q9DCB1 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hmgn3Q9DCB1 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hmgn3Q9DCB1 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hmgn3Q9DCB1 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hmgn3Q9DCB1 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hmgn3Q9DCB1 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Hmgn3Q9DCB1 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hmgn3Q9DCB1 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.44□□□□□ -0.1
Hmgn3Q9DCB1 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hmgn3Q9DCB1 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hmgn3Q9DCB1 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hmgn3Q9DCB1 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hmgn3Q9DCB1 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hmgn3Q9DCB1 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hmgn3Q9DCB1 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hmgn3Q9DCB1 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC14.44□□□□□ -0.1
Hmgn3Q9DCB1 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms