Protein–RNA interactions for Protein: Q9CZQ6

Raet1e, Retinoic acid early-inducible protein 1-epsilon, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1eQ9CZQ6 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Raet1eQ9CZQ6 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.54□□□□□ -0.24
Raet1eQ9CZQ6 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Raet1eQ9CZQ6 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Raet1eQ9CZQ6 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.54□□□□□ -0.24
Raet1eQ9CZQ6 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Raet1eQ9CZQ6 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC13.53□□□□□ -0.24
Raet1eQ9CZQ6 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Raet1eQ9CZQ6 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Raet1eQ9CZQ6 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Raet1eQ9CZQ6 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Raet1eQ9CZQ6 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Raet1eQ9CZQ6 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Raet1eQ9CZQ6 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Raet1eQ9CZQ6 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Raet1eQ9CZQ6 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Raet1eQ9CZQ6 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Raet1eQ9CZQ6 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Raet1eQ9CZQ6 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC13.53□□□□□ -0.24
Raet1eQ9CZQ6 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Raet1eQ9CZQ6 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC13.53□□□□□ -0.24
Raet1eQ9CZQ6 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Raet1eQ9CZQ6 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Raet1eQ9CZQ6 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Raet1eQ9CZQ6 AC154649.1-201ENSMUST00000227392 384 ntBASIC13.53□□□□□ -0.24
Raet1eQ9CZQ6 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC13.53□□□□□ -0.24
Raet1eQ9CZQ6 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Raet1eQ9CZQ6 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Raet1eQ9CZQ6 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Raet1eQ9CZQ6 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Raet1eQ9CZQ6 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Raet1eQ9CZQ6 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Raet1eQ9CZQ6 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Raet1eQ9CZQ6 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Raet1eQ9CZQ6 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Raet1eQ9CZQ6 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Raet1eQ9CZQ6 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Raet1eQ9CZQ6 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.53□□□□□ -0.24
Raet1eQ9CZQ6 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Raet1eQ9CZQ6 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Raet1eQ9CZQ6 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Raet1eQ9CZQ6 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Raet1eQ9CZQ6 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Raet1eQ9CZQ6 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
Raet1eQ9CZQ6 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Raet1eQ9CZQ6 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Raet1eQ9CZQ6 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Raet1eQ9CZQ6 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Raet1eQ9CZQ6 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Raet1eQ9CZQ6 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Raet1eQ9CZQ6 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Raet1eQ9CZQ6 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Raet1eQ9CZQ6 Gm26039-201ENSMUST00000158152 144 ntBASIC13.52□□□□□ -0.25
Raet1eQ9CZQ6 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.52□□□□□ -0.25
Raet1eQ9CZQ6 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Raet1eQ9CZQ6 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Raet1eQ9CZQ6 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC13.52□□□□□ -0.25
Raet1eQ9CZQ6 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Raet1eQ9CZQ6 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Raet1eQ9CZQ6 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Raet1eQ9CZQ6 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Raet1eQ9CZQ6 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Raet1eQ9CZQ6 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Raet1eQ9CZQ6 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Raet1eQ9CZQ6 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Raet1eQ9CZQ6 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Raet1eQ9CZQ6 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Raet1eQ9CZQ6 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Raet1eQ9CZQ6 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Raet1eQ9CZQ6 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Raet1eQ9CZQ6 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Raet1eQ9CZQ6 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Raet1eQ9CZQ6 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Raet1eQ9CZQ6 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Raet1eQ9CZQ6 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Raet1eQ9CZQ6 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Raet1eQ9CZQ6 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Raet1eQ9CZQ6 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Raet1eQ9CZQ6 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.51□□□□□ -0.25
Raet1eQ9CZQ6 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Raet1eQ9CZQ6 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Raet1eQ9CZQ6 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Raet1eQ9CZQ6 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC13.51□□□□□ -0.25
Raet1eQ9CZQ6 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Raet1eQ9CZQ6 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Raet1eQ9CZQ6 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Raet1eQ9CZQ6 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC13.51□□□□□ -0.25
Raet1eQ9CZQ6 Gm715-201ENSMUST00000117865 831 ntBASIC13.51□□□□□ -0.25
Raet1eQ9CZQ6 Gm23547-201ENSMUST00000158210 271 ntBASIC13.51□□□□□ -0.25
Raet1eQ9CZQ6 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC13.51□□□□□ -0.25
Raet1eQ9CZQ6 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Raet1eQ9CZQ6 AC114585.2-202ENSMUST00000228094 426 ntBASIC13.51□□□□□ -0.25
Raet1eQ9CZQ6 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Raet1eQ9CZQ6 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Raet1eQ9CZQ6 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.51□□□□□ -0.25
Raet1eQ9CZQ6 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Raet1eQ9CZQ6 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Raet1eQ9CZQ6 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Raet1eQ9CZQ6 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.51□□□□□ -0.25
Raet1eQ9CZQ6 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms