Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC44A1Q8WWI5 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.34■□□□□ 0.53
SLC44A1Q8WWI5 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
SLC44A1Q8WWI5 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
SLC44A1Q8WWI5 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.33■□□□□ 0.53
SLC44A1Q8WWI5 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.33■□□□□ 0.53
SLC44A1Q8WWI5 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SLC44A1Q8WWI5 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
SLC44A1Q8WWI5 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
SLC44A1Q8WWI5 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SLC44A1Q8WWI5 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.33■□□□□ 0.53
SLC44A1Q8WWI5 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SLC44A1Q8WWI5 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
SLC44A1Q8WWI5 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
SLC44A1Q8WWI5 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
SLC44A1Q8WWI5 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC44A1Q8WWI5 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC44A1Q8WWI5 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC44A1Q8WWI5 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.33■□□□□ 0.52
SLC44A1Q8WWI5 AC116562.2-201ENST00000507042 360 ntBASIC18.33■□□□□ 0.52
SLC44A1Q8WWI5 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.33■□□□□ 0.52
SLC44A1Q8WWI5 SLC25A1P4-201ENST00000567977 778 ntBASIC18.33■□□□□ 0.52
SLC44A1Q8WWI5 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.33■□□□□ 0.52
SLC44A1Q8WWI5 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.33■□□□□ 0.52
SLC44A1Q8WWI5 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.33■□□□□ 0.52
SLC44A1Q8WWI5 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.33■□□□□ 0.52
SLC44A1Q8WWI5 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC44A1Q8WWI5 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.33■□□□□ 0.52
SLC44A1Q8WWI5 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.33■□□□□ 0.52
SLC44A1Q8WWI5 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.33■□□□□ 0.52
SLC44A1Q8WWI5 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
SLC44A1Q8WWI5 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
SLC44A1Q8WWI5 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.33■□□□□ 0.52
SLC44A1Q8WWI5 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC44A1Q8WWI5 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SLC44A1Q8WWI5 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.52
SLC44A1Q8WWI5 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
SLC44A1Q8WWI5 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
SLC44A1Q8WWI5 HOXB1-202ENST00000577092 1414 ntBASIC18.32■□□□□ 0.52
SLC44A1Q8WWI5 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SLC44A1Q8WWI5 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SLC44A1Q8WWI5 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC44A1Q8WWI5 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.32■□□□□ 0.52
SLC44A1Q8WWI5 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.32■□□□□ 0.52
SLC44A1Q8WWI5 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC44A1Q8WWI5 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC44A1Q8WWI5 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC44A1Q8WWI5 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.32■□□□□ 0.52
SLC44A1Q8WWI5 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SLC44A1Q8WWI5 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.32■□□□□ 0.52
SLC44A1Q8WWI5 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SLC44A1Q8WWI5 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
SLC44A1Q8WWI5 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.32■□□□□ 0.52
SLC44A1Q8WWI5 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.32■□□□□ 0.52
SLC44A1Q8WWI5 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SLC44A1Q8WWI5 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SLC44A1Q8WWI5 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.32■□□□□ 0.52
SLC44A1Q8WWI5 CD177P1-201ENST00000606252 935 ntBASIC18.32■□□□□ 0.52
SLC44A1Q8WWI5 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.32■□□□□ 0.52
SLC44A1Q8WWI5 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
SLC44A1Q8WWI5 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SLC44A1Q8WWI5 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC44A1Q8WWI5 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC44A1Q8WWI5 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC44A1Q8WWI5 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SLC44A1Q8WWI5 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.32■□□□□ 0.52
SLC44A1Q8WWI5 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
SLC44A1Q8WWI5 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.32■□□□□ 0.52
SLC44A1Q8WWI5 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SLC44A1Q8WWI5 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
SLC44A1Q8WWI5 LINC01126-201ENST00000623515 1646 ntBASIC18.31■□□□□ 0.52
SLC44A1Q8WWI5 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.31■□□□□ 0.52
SLC44A1Q8WWI5 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
SLC44A1Q8WWI5 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC44A1Q8WWI5 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SLC44A1Q8WWI5 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.31■□□□□ 0.52
SLC44A1Q8WWI5 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC44A1Q8WWI5 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC44A1Q8WWI5 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC44A1Q8WWI5 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.31■□□□□ 0.52
SLC44A1Q8WWI5 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.31■□□□□ 0.52
SLC44A1Q8WWI5 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.31■□□□□ 0.52
SLC44A1Q8WWI5 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.31■□□□□ 0.52
SLC44A1Q8WWI5 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC44A1Q8WWI5 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SLC44A1Q8WWI5 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
SLC44A1Q8WWI5 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC44A1Q8WWI5 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.31■□□□□ 0.52
SLC44A1Q8WWI5 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC44A1Q8WWI5 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SLC44A1Q8WWI5 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.3■□□□□ 0.52
SLC44A1Q8WWI5 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.3■□□□□ 0.52
SLC44A1Q8WWI5 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC44A1Q8WWI5 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC44A1Q8WWI5 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.3■□□□□ 0.52
SLC44A1Q8WWI5 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC44A1Q8WWI5 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.3■□□□□ 0.52
SLC44A1Q8WWI5 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.3■□□□□ 0.52
SLC44A1Q8WWI5 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.3■□□□□ 0.52
SLC44A1Q8WWI5 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms