Protein–RNA interactions for Protein: Q8VHP8

Rab40b, Ras-related protein Rab-40B, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40bQ8VHP8 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rab40bQ8VHP8 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rab40bQ8VHP8 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rab40bQ8VHP8 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.86□□□□□ -0.19
Rab40bQ8VHP8 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rab40bQ8VHP8 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rab40bQ8VHP8 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rab40bQ8VHP8 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rab40bQ8VHP8 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rab40bQ8VHP8 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rab40bQ8VHP8 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.86□□□□□ -0.19
Rab40bQ8VHP8 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rab40bQ8VHP8 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rab40bQ8VHP8 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rab40bQ8VHP8 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rab40bQ8VHP8 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.85□□□□□ -0.19
Rab40bQ8VHP8 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rab40bQ8VHP8 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rab40bQ8VHP8 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.85□□□□□ -0.19
Rab40bQ8VHP8 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rab40bQ8VHP8 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rab40bQ8VHP8 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rab40bQ8VHP8 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rab40bQ8VHP8 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.85□□□□□ -0.19
Rab40bQ8VHP8 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rab40bQ8VHP8 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rab40bQ8VHP8 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rab40bQ8VHP8 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rab40bQ8VHP8 Gm14722-201ENSMUST00000118943 689 ntBASIC13.85□□□□□ -0.19
Rab40bQ8VHP8 Gm11860-201ENSMUST00000122346 1010 ntBASIC13.85□□□□□ -0.19
Rab40bQ8VHP8 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
Rab40bQ8VHP8 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rab40bQ8VHP8 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rab40bQ8VHP8 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC13.85□□□□□ -0.19
Rab40bQ8VHP8 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Rab40bQ8VHP8 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rab40bQ8VHP8 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rab40bQ8VHP8 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rab40bQ8VHP8 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rab40bQ8VHP8 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Rab40bQ8VHP8 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rab40bQ8VHP8 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.85□□□□□ -0.19
Rab40bQ8VHP8 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rab40bQ8VHP8 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rab40bQ8VHP8 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rab40bQ8VHP8 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rab40bQ8VHP8 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rab40bQ8VHP8 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rab40bQ8VHP8 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Rab40bQ8VHP8 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rab40bQ8VHP8 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Rab40bQ8VHP8 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC13.84□□□□□ -0.19
Rab40bQ8VHP8 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Rab40bQ8VHP8 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rab40bQ8VHP8 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
Rab40bQ8VHP8 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Rab40bQ8VHP8 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rab40bQ8VHP8 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rab40bQ8VHP8 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC13.84□□□□□ -0.19
Rab40bQ8VHP8 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC13.84□□□□□ -0.19
Rab40bQ8VHP8 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rab40bQ8VHP8 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rab40bQ8VHP8 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC13.84□□□□□ -0.19
Rab40bQ8VHP8 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC13.84□□□□□ -0.19
Rab40bQ8VHP8 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC13.84□□□□□ -0.19
Rab40bQ8VHP8 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rab40bQ8VHP8 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rab40bQ8VHP8 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Rab40bQ8VHP8 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rab40bQ8VHP8 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rab40bQ8VHP8 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rab40bQ8VHP8 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rab40bQ8VHP8 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rab40bQ8VHP8 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rab40bQ8VHP8 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rab40bQ8VHP8 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rab40bQ8VHP8 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rab40bQ8VHP8 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Rab40bQ8VHP8 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
Rab40bQ8VHP8 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Rab40bQ8VHP8 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rab40bQ8VHP8 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.83□□□□□ -0.2
Rab40bQ8VHP8 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rab40bQ8VHP8 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Rab40bQ8VHP8 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rab40bQ8VHP8 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rab40bQ8VHP8 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rab40bQ8VHP8 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rab40bQ8VHP8 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rab40bQ8VHP8 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC13.83□□□□□ -0.2
Rab40bQ8VHP8 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC13.83□□□□□ -0.2
Rab40bQ8VHP8 Gm20472-201ENSMUST00000174403 1240 ntBASIC13.83□□□□□ -0.2
Rab40bQ8VHP8 Gm7889-201ENSMUST00000185591 958 ntBASIC13.83□□□□□ -0.2
Rab40bQ8VHP8 AC125350.1-201ENSMUST00000225115 903 ntBASIC13.83□□□□□ -0.2
Rab40bQ8VHP8 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rab40bQ8VHP8 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rab40bQ8VHP8 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rab40bQ8VHP8 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rab40bQ8VHP8 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.2
Rab40bQ8VHP8 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms