Protein–RNA interactions for Protein: Q8R4P5

Tmc1, Transmembrane channel-like protein 1, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmc1Q8R4P5 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tmc1Q8R4P5 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Tmc1Q8R4P5 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tmc1Q8R4P5 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tmc1Q8R4P5 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tmc1Q8R4P5 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tmc1Q8R4P5 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tmc1Q8R4P5 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tmc1Q8R4P5 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tmc1Q8R4P5 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Tmc1Q8R4P5 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Tmc1Q8R4P5 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tmc1Q8R4P5 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tmc1Q8R4P5 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Tmc1Q8R4P5 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Tmc1Q8R4P5 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tmc1Q8R4P5 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Tmc1Q8R4P5 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tmc1Q8R4P5 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC18.83■□□□□ 0.6
Tmc1Q8R4P5 Gm7461-201ENSMUST00000058918 827 ntBASIC18.83■□□□□ 0.6
Tmc1Q8R4P5 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tmc1Q8R4P5 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tmc1Q8R4P5 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tmc1Q8R4P5 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Tmc1Q8R4P5 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tmc1Q8R4P5 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tmc1Q8R4P5 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tmc1Q8R4P5 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Tmc1Q8R4P5 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
Tmc1Q8R4P5 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tmc1Q8R4P5 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tmc1Q8R4P5 Zkscan3-208ENSMUST00000224820 5398 ntBASIC18.82■□□□□ 0.6
Tmc1Q8R4P5 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC18.82■□□□□ 0.6
Tmc1Q8R4P5 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tmc1Q8R4P5 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC18.82■□□□□ 0.6
Tmc1Q8R4P5 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
Tmc1Q8R4P5 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tmc1Q8R4P5 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tmc1Q8R4P5 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC18.82■□□□□ 0.6
Tmc1Q8R4P5 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tmc1Q8R4P5 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tmc1Q8R4P5 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tmc1Q8R4P5 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tmc1Q8R4P5 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC18.82■□□□□ 0.6
Tmc1Q8R4P5 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
Tmc1Q8R4P5 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tmc1Q8R4P5 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tmc1Q8R4P5 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Tmc1Q8R4P5 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tmc1Q8R4P5 Gm10676-201ENSMUST00000098778 3221 ntBASIC18.81■□□□□ 0.6
Tmc1Q8R4P5 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tmc1Q8R4P5 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
Tmc1Q8R4P5 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Tmc1Q8R4P5 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tmc1Q8R4P5 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tmc1Q8R4P5 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tmc1Q8R4P5 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tmc1Q8R4P5 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Tmc1Q8R4P5 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Tmc1Q8R4P5 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
Tmc1Q8R4P5 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tmc1Q8R4P5 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tmc1Q8R4P5 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tmc1Q8R4P5 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Tmc1Q8R4P5 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tmc1Q8R4P5 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tmc1Q8R4P5 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tmc1Q8R4P5 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Tmc1Q8R4P5 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC18.81■□□□□ 0.6
Tmc1Q8R4P5 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tmc1Q8R4P5 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tmc1Q8R4P5 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tmc1Q8R4P5 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tmc1Q8R4P5 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tmc1Q8R4P5 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tmc1Q8R4P5 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tmc1Q8R4P5 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tmc1Q8R4P5 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tmc1Q8R4P5 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC18.8■□□□□ 0.6
Tmc1Q8R4P5 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tmc1Q8R4P5 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tmc1Q8R4P5 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tmc1Q8R4P5 Gm15794-201ENSMUST00000120182 631 ntBASIC18.8■□□□□ 0.6
Tmc1Q8R4P5 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC18.8■□□□□ 0.6
Tmc1Q8R4P5 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC18.8■□□□□ 0.6
Tmc1Q8R4P5 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tmc1Q8R4P5 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tmc1Q8R4P5 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tmc1Q8R4P5 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tmc1Q8R4P5 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tmc1Q8R4P5 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tmc1Q8R4P5 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Tmc1Q8R4P5 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tmc1Q8R4P5 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tmc1Q8R4P5 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tmc1Q8R4P5 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC18.79■□□□□ 0.6
Tmc1Q8R4P5 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tmc1Q8R4P5 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tmc1Q8R4P5 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tmc1Q8R4P5 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms