Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Sf3a1Q8K4Z5 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sf3a1Q8K4Z5 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sf3a1Q8K4Z5 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sf3a1Q8K4Z5 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sf3a1Q8K4Z5 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sf3a1Q8K4Z5 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sf3a1Q8K4Z5 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sf3a1Q8K4Z5 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Sf3a1Q8K4Z5 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sf3a1Q8K4Z5 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Sf3a1Q8K4Z5 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sf3a1Q8K4Z5 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sf3a1Q8K4Z5 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sf3a1Q8K4Z5 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sf3a1Q8K4Z5 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC18.81■□□□□ 0.6
Sf3a1Q8K4Z5 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC18.81■□□□□ 0.6
Sf3a1Q8K4Z5 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sf3a1Q8K4Z5 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC18.81■□□□□ 0.6
Sf3a1Q8K4Z5 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sf3a1Q8K4Z5 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sf3a1Q8K4Z5 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sf3a1Q8K4Z5 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Sf3a1Q8K4Z5 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sf3a1Q8K4Z5 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sf3a1Q8K4Z5 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sf3a1Q8K4Z5 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sf3a1Q8K4Z5 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sf3a1Q8K4Z5 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sf3a1Q8K4Z5 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sf3a1Q8K4Z5 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sf3a1Q8K4Z5 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sf3a1Q8K4Z5 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sf3a1Q8K4Z5 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC18.8■□□□□ 0.6
Sf3a1Q8K4Z5 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sf3a1Q8K4Z5 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sf3a1Q8K4Z5 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sf3a1Q8K4Z5 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sf3a1Q8K4Z5 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sf3a1Q8K4Z5 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC18.8■□□□□ 0.6
Sf3a1Q8K4Z5 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sf3a1Q8K4Z5 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC18.8■□□□□ 0.6
Sf3a1Q8K4Z5 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC18.8■□□□□ 0.6
Sf3a1Q8K4Z5 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sf3a1Q8K4Z5 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Sf3a1Q8K4Z5 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC18.8■□□□□ 0.6
Sf3a1Q8K4Z5 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sf3a1Q8K4Z5 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sf3a1Q8K4Z5 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sf3a1Q8K4Z5 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sf3a1Q8K4Z5 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sf3a1Q8K4Z5 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sf3a1Q8K4Z5 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sf3a1Q8K4Z5 Gm44443-201ENSMUST00000204396 5633 ntBASIC18.8■□□□□ 0.6
Sf3a1Q8K4Z5 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC18.8■□□□□ 0.6
Sf3a1Q8K4Z5 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sf3a1Q8K4Z5 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sf3a1Q8K4Z5 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC18.79■□□□□ 0.6
Sf3a1Q8K4Z5 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sf3a1Q8K4Z5 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC18.79■□□□□ 0.6
Sf3a1Q8K4Z5 Gm6184-201ENSMUST00000120403 1261 ntBASIC18.79■□□□□ 0.6
Sf3a1Q8K4Z5 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sf3a1Q8K4Z5 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sf3a1Q8K4Z5 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sf3a1Q8K4Z5 Gm18489-201ENSMUST00000172565 551 ntBASIC18.79■□□□□ 0.6
Sf3a1Q8K4Z5 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sf3a1Q8K4Z5 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sf3a1Q8K4Z5 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sf3a1Q8K4Z5 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sf3a1Q8K4Z5 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sf3a1Q8K4Z5 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Sf3a1Q8K4Z5 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sf3a1Q8K4Z5 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sf3a1Q8K4Z5 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sf3a1Q8K4Z5 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sf3a1Q8K4Z5 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sf3a1Q8K4Z5 AC154527.4-201ENSMUST00000224364 1667 ntBASIC18.79■□□□□ 0.6
Sf3a1Q8K4Z5 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC18.79■□□□□ 0.6
Sf3a1Q8K4Z5 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Sf3a1Q8K4Z5 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sf3a1Q8K4Z5 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sf3a1Q8K4Z5 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Sf3a1Q8K4Z5 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sf3a1Q8K4Z5 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sf3a1Q8K4Z5 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sf3a1Q8K4Z5 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Sf3a1Q8K4Z5 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sf3a1Q8K4Z5 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sf3a1Q8K4Z5 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sf3a1Q8K4Z5 Gm27528-202ENSMUST00000222916 2012 ntBASIC18.78■□□□□ 0.6
Sf3a1Q8K4Z5 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Sf3a1Q8K4Z5 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sf3a1Q8K4Z5 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sf3a1Q8K4Z5 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sf3a1Q8K4Z5 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sf3a1Q8K4Z5 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC18.78■□□□□ 0.6
Sf3a1Q8K4Z5 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC18.78■□□□□ 0.6
Sf3a1Q8K4Z5 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC18.78■□□□□ 0.6
Sf3a1Q8K4Z5 Gm8318-201ENSMUST00000182954 872 ntBASIC18.78■□□□□ 0.6
Sf3a1Q8K4Z5 Gm5253-201ENSMUST00000187104 1025 ntBASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms