Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 AC068472.1-201ENST00000474589 881 ntBASIC19.73■□□□□ 0.75
PRPF38BQ5VTL8 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC19.73■□□□□ 0.75
PRPF38BQ5VTL8 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC19.73■□□□□ 0.75
PRPF38BQ5VTL8 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PRPF38BQ5VTL8 KRT19P2-202ENST00000557173 1012 ntBASIC19.73■□□□□ 0.75
PRPF38BQ5VTL8 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PRPF38BQ5VTL8 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC19.73■□□□□ 0.75
PRPF38BQ5VTL8 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.73■□□□□ 0.75
PRPF38BQ5VTL8 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC19.73■□□□□ 0.75
PRPF38BQ5VTL8 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.73■□□□□ 0.75
PRPF38BQ5VTL8 AC009093.7-201ENST00000623853 1223 ntBASIC19.73■□□□□ 0.75
PRPF38BQ5VTL8 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PRPF38BQ5VTL8 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PRPF38BQ5VTL8 AL137060.1-201ENST00000618151 2648 ntBASIC19.73■□□□□ 0.75
PRPF38BQ5VTL8 CU639417.3-201ENST00000624240 1404 ntBASIC19.73■□□□□ 0.75
PRPF38BQ5VTL8 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
PRPF38BQ5VTL8 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.73■□□□□ 0.75
PRPF38BQ5VTL8 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.73■□□□□ 0.75
PRPF38BQ5VTL8 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.73■□□□□ 0.75
PRPF38BQ5VTL8 AL121761.2-201ENST00000598007 1648 ntBASIC19.73■□□□□ 0.75
PRPF38BQ5VTL8 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
PRPF38BQ5VTL8 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
PRPF38BQ5VTL8 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PRPF38BQ5VTL8 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.72■□□□□ 0.75
PRPF38BQ5VTL8 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PRPF38BQ5VTL8 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.72■□□□□ 0.75
PRPF38BQ5VTL8 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC19.72■□□□□ 0.75
PRPF38BQ5VTL8 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PRPF38BQ5VTL8 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
PRPF38BQ5VTL8 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PRPF38BQ5VTL8 HILS1-202ENST00000545329 423 ntBASIC19.72■□□□□ 0.75
PRPF38BQ5VTL8 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC19.72■□□□□ 0.75
PRPF38BQ5VTL8 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PRPF38BQ5VTL8 AL049796.1-201ENST00000565336 1766 ntBASIC19.72■□□□□ 0.75
PRPF38BQ5VTL8 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PRPF38BQ5VTL8 BCAR1-209ENST00000546196 1340 ntBASIC19.72■□□□□ 0.75
PRPF38BQ5VTL8 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.72■□□□□ 0.75
PRPF38BQ5VTL8 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
PRPF38BQ5VTL8 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PRPF38BQ5VTL8 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PRPF38BQ5VTL8 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PRPF38BQ5VTL8 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PRPF38BQ5VTL8 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.71■□□□□ 0.75
PRPF38BQ5VTL8 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.71■□□□□ 0.75
PRPF38BQ5VTL8 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PRPF38BQ5VTL8 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
PRPF38BQ5VTL8 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
PRPF38BQ5VTL8 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.71■□□□□ 0.75
PRPF38BQ5VTL8 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC19.71■□□□□ 0.75
PRPF38BQ5VTL8 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PRPF38BQ5VTL8 AC074386.1-202ENST00000463561 864 ntBASIC19.71■□□□□ 0.75
PRPF38BQ5VTL8 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC19.71■□□□□ 0.75
PRPF38BQ5VTL8 AC092658.1-201ENST00000505836 891 ntBASIC19.71■□□□□ 0.75
PRPF38BQ5VTL8 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC19.71■□□□□ 0.75
PRPF38BQ5VTL8 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC19.71■□□□□ 0.75
PRPF38BQ5VTL8 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PRPF38BQ5VTL8 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC19.71■□□□□ 0.75
PRPF38BQ5VTL8 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PRPF38BQ5VTL8 AC034236.2-201ENST00000606662 1610 ntBASIC19.71■□□□□ 0.75
PRPF38BQ5VTL8 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.71■□□□□ 0.75
PRPF38BQ5VTL8 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PRPF38BQ5VTL8 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.71■□□□□ 0.75
PRPF38BQ5VTL8 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PRPF38BQ5VTL8 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PRPF38BQ5VTL8 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.7■□□□□ 0.74
PRPF38BQ5VTL8 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
PRPF38BQ5VTL8 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC19.7■□□□□ 0.74
PRPF38BQ5VTL8 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PRPF38BQ5VTL8 AC104417.2-201ENST00000562989 1793 ntBASIC19.7■□□□□ 0.74
PRPF38BQ5VTL8 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
PRPF38BQ5VTL8 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PRPF38BQ5VTL8 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
PRPF38BQ5VTL8 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PRPF38BQ5VTL8 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PRPF38BQ5VTL8 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PRPF38BQ5VTL8 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PRPF38BQ5VTL8 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC19.7■□□□□ 0.74
PRPF38BQ5VTL8 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC19.7■□□□□ 0.74
PRPF38BQ5VTL8 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC19.7■□□□□ 0.74
PRPF38BQ5VTL8 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC19.7■□□□□ 0.74
PRPF38BQ5VTL8 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC19.7■□□□□ 0.74
PRPF38BQ5VTL8 AC017083.2-201ENST00000608069 979 ntBASIC19.7■□□□□ 0.74
PRPF38BQ5VTL8 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
PRPF38BQ5VTL8 AC092720.2-201ENST00000602388 1665 ntBASIC19.7■□□□□ 0.74
PRPF38BQ5VTL8 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PRPF38BQ5VTL8 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PRPF38BQ5VTL8 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PRPF38BQ5VTL8 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
PRPF38BQ5VTL8 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.69■□□□□ 0.74
PRPF38BQ5VTL8 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PRPF38BQ5VTL8 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.69■□□□□ 0.74
PRPF38BQ5VTL8 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PRPF38BQ5VTL8 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PRPF38BQ5VTL8 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PRPF38BQ5VTL8 NME6-203ENST00000415644 849 ntTSL 2 BASIC19.69■□□□□ 0.74
PRPF38BQ5VTL8 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC19.69■□□□□ 0.74
PRPF38BQ5VTL8 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
PRPF38BQ5VTL8 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC19.69■□□□□ 0.74
PRPF38BQ5VTL8 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PRPF38BQ5VTL8 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms