Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AP005117.1-201ENST00000584346 1413 ntBASIC20.76■□□□□ 0.91
CCNA1P78396 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCNA1P78396 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCNA1P78396 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CCNA1P78396 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCNA1P78396 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCNA1P78396 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCNA1P78396 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
CCNA1P78396 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
CCNA1P78396 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCNA1P78396 AC007952.6-201ENST00000573168 2673 ntBASIC20.75■□□□□ 0.91
CCNA1P78396 AC003957.1-201ENST00000625108 2673 ntBASIC20.75■□□□□ 0.91
CCNA1P78396 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.75■□□□□ 0.91
CCNA1P78396 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCNA1P78396 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CCNA1P78396 LINC00602-201ENST00000629776 2065 ntBASIC20.75■□□□□ 0.91
CCNA1P78396 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCNA1P78396 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCNA1P78396 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC20.75■□□□□ 0.91
CCNA1P78396 FUOM-202ENST00000368551 628 ntTSL 3 BASIC20.75■□□□□ 0.91
CCNA1P78396 FABP5-202ENST00000396359 986 ntTSL 5 BASIC20.75■□□□□ 0.91
CCNA1P78396 MIR940-201ENST00000401276 94 ntBASIC20.75■□□□□ 0.91
CCNA1P78396 ABCD1P5-201ENST00000445663 754 ntBASIC20.75■□□□□ 0.91
CCNA1P78396 RBSN-204ENST00000449050 903 ntTSL 2 BASIC20.75■□□□□ 0.91
CCNA1P78396 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC20.75■□□□□ 0.91
CCNA1P78396 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCNA1P78396 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC20.75■□□□□ 0.91
CCNA1P78396 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCNA1P78396 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC20.75■□□□□ 0.91
CCNA1P78396 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCNA1P78396 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCNA1P78396 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCNA1P78396 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCNA1P78396 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCNA1P78396 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCNA1P78396 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCNA1P78396 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCNA1P78396 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCNA1P78396 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.74■□□□□ 0.91
CCNA1P78396 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCNA1P78396 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCNA1P78396 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCNA1P78396 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCNA1P78396 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCNA1P78396 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.74■□□□□ 0.91
CCNA1P78396 BX842568.4-201ENST00000421222 227 ntBASIC20.74■□□□□ 0.91
CCNA1P78396 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC20.74■□□□□ 0.91
CCNA1P78396 COX10-202ENST00000429152 875 ntTSL 2 BASIC20.74■□□□□ 0.91
CCNA1P78396 KRT18P65-201ENST00000439811 1286 ntBASIC20.74■□□□□ 0.91
CCNA1P78396 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCNA1P78396 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
CCNA1P78396 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC20.74■□□□□ 0.91
CCNA1P78396 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC20.74■□□□□ 0.91
CCNA1P78396 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC20.74■□□□□ 0.91
CCNA1P78396 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC20.74■□□□□ 0.91
CCNA1P78396 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC20.74■□□□□ 0.91
CCNA1P78396 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.74■□□□□ 0.91
CCNA1P78396 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC20.74■□□□□ 0.91
CCNA1P78396 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.74■□□□□ 0.91
CCNA1P78396 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCNA1P78396 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CCNA1P78396 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC20.74■□□□□ 0.91
CCNA1P78396 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.74■□□□□ 0.91
CCNA1P78396 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCNA1P78396 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCNA1P78396 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCNA1P78396 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCNA1P78396 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
CCNA1P78396 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCNA1P78396 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCNA1P78396 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC20.73■□□□□ 0.91
CCNA1P78396 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC20.73■□□□□ 0.91
CCNA1P78396 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CCNA1P78396 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.73■□□□□ 0.91
CCNA1P78396 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC20.73■□□□□ 0.91
CCNA1P78396 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC20.73■□□□□ 0.91
CCNA1P78396 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.73■□□□□ 0.91
CCNA1P78396 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC20.73■□□□□ 0.91
CCNA1P78396 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCNA1P78396 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCNA1P78396 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCNA1P78396 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCNA1P78396 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCNA1P78396 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CCNA1P78396 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCNA1P78396 AC099343.3-201ENST00000605834 2503 ntBASIC20.72■□□□□ 0.91
CCNA1P78396 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.72■□□□□ 0.91
CCNA1P78396 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCNA1P78396 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC20.72■□□□□ 0.91
CCNA1P78396 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCNA1P78396 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC20.72■□□□□ 0.91
CCNA1P78396 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCNA1P78396 AC021087.4-201ENST00000563761 564 ntBASIC20.72■□□□□ 0.91
CCNA1P78396 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC20.72■□□□□ 0.91
CCNA1P78396 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCNA1P78396 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.72■□□□□ 0.91
CCNA1P78396 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCNA1P78396 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.72■□□□□ 0.91
CCNA1P78396 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
CCNA1P78396 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms