Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox2P48432 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox2P48432 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox2P48432 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox2P48432 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.45□□□□□ -0.1
Sox2P48432 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox2P48432 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sox2P48432 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Sox2P48432 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sox2P48432 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
Sox2P48432 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox2P48432 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.44□□□□□ -0.1
Sox2P48432 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox2P48432 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox2P48432 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox2P48432 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox2P48432 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox2P48432 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sox2P48432 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sox2P48432 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Sox2P48432 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC14.44□□□□□ -0.1
Sox2P48432 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC14.44□□□□□ -0.1
Sox2P48432 Gm43799-201ENSMUST00000201845 579 ntBASIC14.44□□□□□ -0.1
Sox2P48432 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Sox2P48432 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox2P48432 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox2P48432 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Sox2P48432 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox2P48432 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Sox2P48432 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox2P48432 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC14.44□□□□□ -0.1
Sox2P48432 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sox2P48432 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox2P48432 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Sox2P48432 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox2P48432 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.44□□□□□ -0.1
Sox2P48432 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.44□□□□□ -0.1
Sox2P48432 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Sox2P48432 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox2P48432 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox2P48432 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox2P48432 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox2P48432 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox2P48432 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox2P48432 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox2P48432 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox2P48432 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.43□□□□□ -0.1
Sox2P48432 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox2P48432 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox2P48432 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.43□□□□□ -0.1
Sox2P48432 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox2P48432 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox2P48432 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sox2P48432 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox2P48432 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox2P48432 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox2P48432 Gm22697-201ENSMUST00000175194 63 ntBASIC14.43□□□□□ -0.1
Sox2P48432 Gm9987-201ENSMUST00000069768 567 ntBASIC14.43□□□□□ -0.1
Sox2P48432 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox2P48432 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sox2P48432 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox2P48432 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Sox2P48432 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sox2P48432 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox2P48432 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.43□□□□□ -0.1
Sox2P48432 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox2P48432 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox2P48432 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Sox2P48432 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sox2P48432 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Sox2P48432 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sox2P48432 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox2P48432 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Sox2P48432 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox2P48432 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox2P48432 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Sox2P48432 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Sox2P48432 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sox2P48432 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Sox2P48432 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox2P48432 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC14.42□□□□□ -0.1
Sox2P48432 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sox2P48432 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC14.42□□□□□ -0.1
Sox2P48432 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox2P48432 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox2P48432 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox2P48432 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.42□□□□□ -0.1
Sox2P48432 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox2P48432 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox2P48432 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox2P48432 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Sox2P48432 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Sox2P48432 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox2P48432 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox2P48432 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox2P48432 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox2P48432 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sox2P48432 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox2P48432 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox2P48432 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms