Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC23.11■■□□□ 1.29
COL15A1P39059 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
COL15A1P39059 INTS4P1-201ENST00000438455 1935 ntBASIC23.11■■□□□ 1.29
COL15A1P39059 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
COL15A1P39059 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
COL15A1P39059 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
COL15A1P39059 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
COL15A1P39059 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC23.11■■□□□ 1.29
COL15A1P39059 SDHAP2-201ENST00000455183 2001 ntBASIC23.11■■□□□ 1.29
COL15A1P39059 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
COL15A1P39059 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC23.11■■□□□ 1.29
COL15A1P39059 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
COL15A1P39059 RPL13AP23-201ENST00000480739 586 ntBASIC23.11■■□□□ 1.29
COL15A1P39059 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC23.11■■□□□ 1.29
COL15A1P39059 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC23.11■■□□□ 1.29
COL15A1P39059 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
COL15A1P39059 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC23.11■■□□□ 1.29
COL15A1P39059 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC23.1■■□□□ 1.29
COL15A1P39059 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC23.1■■□□□ 1.29
COL15A1P39059 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
COL15A1P39059 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
COL15A1P39059 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC23.1■■□□□ 1.29
COL15A1P39059 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC23.1■■□□□ 1.29
COL15A1P39059 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
COL15A1P39059 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
COL15A1P39059 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC23.1■■□□□ 1.29
COL15A1P39059 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC23.1■■□□□ 1.29
COL15A1P39059 BX842568.4-201ENST00000421222 227 ntBASIC23.1■■□□□ 1.29
COL15A1P39059 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC23.1■■□□□ 1.29
COL15A1P39059 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
COL15A1P39059 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
COL15A1P39059 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC23.1■■□□□ 1.29
COL15A1P39059 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
COL15A1P39059 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC23.09■■□□□ 1.29
COL15A1P39059 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
COL15A1P39059 AL031598.1-201ENST00000561511 1773 ntBASIC23.09■■□□□ 1.29
COL15A1P39059 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
COL15A1P39059 PMS2P7-201ENST00000506558 1336 ntBASIC23.09■■□□□ 1.29
COL15A1P39059 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
COL15A1P39059 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
COL15A1P39059 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
COL15A1P39059 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
COL15A1P39059 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
COL15A1P39059 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
COL15A1P39059 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC23.09■■□□□ 1.29
COL15A1P39059 AC009533.2-201ENST00000543664 586 ntBASIC23.09■■□□□ 1.29
COL15A1P39059 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC23.09■■□□□ 1.29
COL15A1P39059 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC23.09■■□□□ 1.29
COL15A1P39059 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC23.09■■□□□ 1.29
COL15A1P39059 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC23.09■■□□□ 1.29
COL15A1P39059 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
COL15A1P39059 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC23.09■■□□□ 1.29
COL15A1P39059 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
COL15A1P39059 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
COL15A1P39059 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
COL15A1P39059 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
COL15A1P39059 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC23.08■■□□□ 1.29
COL15A1P39059 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
COL15A1P39059 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC23.08■■□□□ 1.29
COL15A1P39059 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
COL15A1P39059 FABP5-202ENST00000396359 986 ntTSL 5 BASIC23.08■■□□□ 1.29
COL15A1P39059 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC23.08■■□□□ 1.29
COL15A1P39059 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC23.08■■□□□ 1.29
COL15A1P39059 AC011467.2-201ENST00000598425 242 ntBASIC23.08■■□□□ 1.29
COL15A1P39059 TERC-201ENST00000602385 541 ntBASIC23.08■■□□□ 1.29
COL15A1P39059 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC23.08■■□□□ 1.29
COL15A1P39059 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC23.08■■□□□ 1.29
COL15A1P39059 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
COL15A1P39059 AC009154.2-201ENST00000621177 724 ntBASIC23.08■■□□□ 1.29
COL15A1P39059 AC116407.3-201ENST00000623905 1129 ntBASIC23.08■■□□□ 1.29
COL15A1P39059 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC23.08■■□□□ 1.29
COL15A1P39059 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
COL15A1P39059 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.28
COL15A1P39059 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
COL15A1P39059 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
COL15A1P39059 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
COL15A1P39059 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC23.07■■□□□ 1.28
COL15A1P39059 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC23.07■■□□□ 1.28
COL15A1P39059 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC23.07■■□□□ 1.28
COL15A1P39059 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
COL15A1P39059 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC23.07■■□□□ 1.28
COL15A1P39059 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
COL15A1P39059 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
COL15A1P39059 DANCR-204ENST00000444958 709 ntTSL 3 BASIC23.07■■□□□ 1.28
COL15A1P39059 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC23.07■■□□□ 1.28
COL15A1P39059 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC23.07■■□□□ 1.28
COL15A1P39059 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC23.07■■□□□ 1.28
COL15A1P39059 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
COL15A1P39059 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC23.07■■□□□ 1.28
COL15A1P39059 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
COL15A1P39059 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
COL15A1P39059 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC23.07■■□□□ 1.28
COL15A1P39059 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
COL15A1P39059 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
COL15A1P39059 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
COL15A1P39059 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC23.07■■□□□ 1.28
COL15A1P39059 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC23.07■■□□□ 1.28
COL15A1P39059 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC23.06■■□□□ 1.28
COL15A1P39059 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC23.06■■□□□ 1.28
COL15A1P39059 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms